Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1029 ATGTCTCCTCTTAGTCTGTTTGATCCAGTGACGCAACGTCTATGCCTCTTTTTTATGATTCAGGTAAAAATTTATGCCAATGCTTCAAGAAGACGGATTTTACAAGCTTTTGGTTGGTCCGACCTTTCAGATAGACTCTGTACAAATGGAAATAACACGCTTATCCATGTTCTGCCTATGGCATCTTTGAGACCTGAGACCTTAAAGGATTACTTGAAGACCTACAAGGAGCAATTTACAGCAGTTTTGGCGTTTCGTCCAACAGGTTGGACTTTCAGTGAGAAGATAAGCAACGATCTGGAACTAATTAAACCTGTTACCAAAGGAAATATCACGATATATGGGGTTCCCTACAGTGAGCACTCCAGCTTTACAGAACTGCGAGATTTTGTTCAGTTTTTGAGACCTGACAAGATCATTCCAACTGTGAATGTTGGGAATGCTGCTAATCGAGAAAAGATGCAATCCTACTTCCGAGACTGGTTGAGGTGCTAA 495 0.4121 MSPLSLFDPVTQRLCLFFMIQVKIYANASRRRILQAFGWSDLSDRLCTNGNNTLIHVLPMASLRPETLKDYLKTYKEQFTAVLAFRPTGWTFSEKISNDLELIKPVTKGNITIYGVPYSEHSSFTELRDFVQFLRPDKIIPTVNVGNAANREKMQSYFRDWLRC* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1029 164 Pfam DNA repair metallo-beta-lactamase 42 147 IPR011084 -
Pvu1g1029 164 PANTHER DNA CROSS-LINK REPAIR PROTEIN SNM1 20 164 - -
Pvu1g1029 164 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 20 164 - -
Pvu1g1029 164 Gene3D - 13 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1029 Pvu-Chr1 22049138 22052596 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1029 K15340 - pvu:PHAVU_001G099100g 337.035