Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1028 ATGGTGCTATCCACCGACGCATCACCGCCACCTGCGTTAGGAGACGAGCCGTTACCTCTCGACGGCGACGGTTACGACCTGAACGATGACGACGTCGCTTCGTCCGGCGTCGTTTCACTGGACGACGAGGGTTTTCCATCGCAACTCTCCGGATCGGAAACGCCGTCGGGAAAGAGCAGTTTCACCGACGATTTCTATCGCTGCGGAACCGATTGGTCCTCGCTGTTGTTGCTGGAAGATAAAAATAATAGACAAATCGATTTCGAACGCTCGGGGAAGAAGATGAAGCAGACCAACCTGTTTCAGATTTGGGGTTTCAAAAGAAATGACGCTGTAGGTTCAGTTGAATCTGGACCGAGTCTGAGTGTTTATTCTGATGAAGGAGGTAGTTCTTCTGAGAATAAGATTGTGAAACCTGGAAATTGGGGTTCAATTTTGCGCGACAGAGGGAAAGAGTCTGAGAACACGAAATCTCTCCGCAAGAGAAAGGGTTTCAGTGGTGAAAATAGGGTTACACGTTCCTGTCCCTTTTATAAGAAAATCCCAGGGACAACATTCACTGTTGATGCTTTTCGGTATGGGTGTGTTGAAGGGTGTTCAGCGTATTTTCTTAGTCATTTCCATTACGATCACTATGGTGGCCTCAGCAAGAAATGGTCACATGGCCCTATATATTGCTCTCCTCTCACGGGACGGCTTGTTCAAATGTGTCTCTCTGTAAATCCTTTGTATATCTACCCTTTAGAATTTAATACCGAACATTTGATTGATGGTGTCAAAGTGACTTTGTTAGAAGCTAATCATTGCCCTGGTGCGGCTTTGATTCACTTTAGCCTCCCAAATGACCAATGCTATTTGCACACTGGGGACTTTAGAGCGTGTAAAGCAATGCAAGCTTACCATCTTCTTGTAAATCAACGTGTGAATGTACTTTATTTGGATACAACATATTGCGACCCAAAATACAGGTTCCCTTCCAAGGAAGATGTACTAAATTATGTTGTCAAAATTACGAAGAACCACCTCAAAATTCATCACAGAACTTTAGTGGTTGTTGGGGCATACAGTATTGGCAAAGAATGTGTATATCTTGCAATTTCTAAAGCTCTTGGGACAGATCAGAGATCAATACTTAAGCGATTGGTTTGTCTTCTTGAAGATCTGATTGGCAAACAACAATTTTGGCTATTTGTGGTTGTACCATCCTTGGACTTGGGGTCAACCCATGTTTGA 1233 0.4404 MVLSTDASPPPALGDEPLPLDGDGYDLNDDDVASSGVVSLDDEGFPSQLSGSETPSGKSSFTDDFYRCGTDWSSLLLLEDKNNRQIDFERSGKKMKQTNLFQIWGFKRNDAVGSVESGPSLSVYSDEGGSSSENKIVKPGNWGSILRDRGKESENTKSLRKRKGFSGENRVTRSCPFYKKIPGTTFTVDAFRYGCVEGCSAYFLSHFHYDHYGGLSKKWSHGPIYCSPLTGRLVQMCLSVNPLYIYPLEFNTEHLIDGVKVTLLEANHCPGAALIHFSLPNDQCYLHTGDFRACKAMQAYHLLVNQRVNVLYLDTTYCDPKYRFPSKEDVLNYVVKITKNHLKIHHRTLVVVGAYSIGKECVYLAISKALGTDQRSILKRLVCLLEDLIGKQQFWLFVVVPSLDLGSTHV* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1028 410 SUPERFAMILY Metallo-hydrolase/oxidoreductase 197 371 IPR036866 -
Pvu1g1028 410 CDD SNM1A-1C-like_MBL-fold 169 320 - -
Pvu1g1028 410 MobiDBLite consensus disorder prediction 45 60 - -
Pvu1g1028 410 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 77 371 - -
Pvu1g1028 410 Gene3D - 181 322 IPR036866 -
Pvu1g1028 410 MobiDBLite consensus disorder prediction 1 60 - -
Pvu1g1028 410 PANTHER DNA CROSS-LINK REPAIR PROTEIN SNM1 77 371 - -
Pvu1g1028 410 Gene3D - 323 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1028 Pvu-Chr1 22039612 22042381 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1028 K15340 - gmx:100790844 569.696