Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1024 ATGGAACCCGAACCTAGATGCATGGAGGTGAAACTCATTTCGTGCAAGGACCTCAGAGCCTTCAACTTTTTCCAAAAGCTCACTGTTTACGCGACCGTCTTCATCGACAGCGAGGATCCGAAGAGGGAAATGACAGAGGAGCGGAGGCAGCGACAGCGAACCCTAACGCACAGAGAAAGCGATGACGATGGCAGCAATCCCGATTGGAACCACAACGTGCGTTTCGATTTAGGGTGGCTTTCGCACTCGCCACGCCACTCCGATTATGACGATCTCTTCCTCTGCTTTGAGTTCCGCCACGACGGCCTCATCCTCGGCGATAAAGTCGTCGGCGAGTGCCGCGTGCCGTTCACCGGTCTGATCCGAGACGCTACCGCCGGCACAGCGAGGTTCGTGAGCTACGAGGTTCGATCCGCCGAGGGAAAGCCCAACGGTATCTTCAATTTCTCGTACAAATTGACTGGGATTGGGATTGGGATTGGGATTGGAAATGGGAGTGGGAGCGGAACCCACTCGTCGCAGATTCTCCAAGGGAGAATCTCCGGGTACCCTGTTCTGGCACCGGAGGATTGCGCGTGTGCTCCTAATAGGGTACAATATCCCACGTGCGAAATCAATAACACGTGCTGCTATCCAACGGTCGCGTTGCCGGTGGGGTCCCCCGTCTATCCCGCAGCTGCTCCACCGCCGCCGGCTATGCTTCCGCCCTACGGAGAATATCATTTCAATTATCCACATCCGCCACCACCGCCGCCGGTTGCGTATCCATATCCTCCCCCACCTCCTCCGGCGGTGCATGCTTACCCACATTTTGGGCCGGAGGCCCATCCTTGGCTACAAGGCCCGTATTGTGAACGCAGGTGGTAA 867 0.5675 MEPEPRCMEVKLISCKDLRAFNFFQKLTVYATVFIDSEDPKREMTEERRQRQRTLTHRESDDDGSNPDWNHNVRFDLGWLSHSPRHSDYDDLFLCFEFRHDGLILGDKVVGECRVPFTGLIRDATAGTARFVSYEVRSAEGKPNGIFNFSYKLTGIGIGIGIGNGSGSGTHSSQILQGRISGYPVLAPEDCACAPNRVQYPTCEINNTCCYPTVALPVGSPVYPAAAPPPPAMLPPYGEYHFNYPHPPPPPPVAYPYPPPPPPAVHAYPHFGPEAHPWLQGPYCERRW* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1024 288 CDD C2_SRC2_like 8 149 IPR044750 GO:0006952
Pvu1g1024 288 ProSiteProfiles C2 domain profile. 1 131 IPR000008 -
Pvu1g1024 288 Gene3D C2 domain 1 152 IPR035892 -
Pvu1g1024 288 Pfam C2 domain 9 120 IPR000008 -
Pvu1g1024 288 PANTHER INGRESSION PROTEIN FIC1 1 270 - -
Pvu1g1024 288 MobiDBLite consensus disorder prediction 41 67 - -
Pvu1g1024 288 PANTHER PROTEIN SRC2-LIKE 1 270 - -
Pvu1g1024 288 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 123 IPR035892 -
Pvu1g1024 288 SMART C2_3c 7 129 IPR000008 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1024 - K22733 gmx:106796391 363.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1024 1 21968259 21969125 Pvu1g1024 1 21968259 21969125 ECH