Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1022 ATGAAGAACCGAGCATCAAGGTTTCTGAAGCAGATCATATCAAATCTGAGCTCAATGGCCAAGTCAAAAACCATGGCTTTGAAGTCCAAAACTAACGCCGTACGGGCTCGTTTGCTCATATTCTCACTGATGAAGAACAAAAGGTTCTTGATGAGTTCCCTCTCTGAAAAGTTCCATTCTGTGTGGGGGAACGATTCTCAGTCCAAGGATGATTGCTTATTGGAAGAGGGCAGTGAAGAAAGCAAGGCCATAGTGTTGTACAACAATTCACACTCCTACGAGGCCTTGCCGAACCCCTCTGAAACCCTAGTGGTTGAGGAGCAAGACCAAGAGTGCTATGAAGGTTACTACAACTATGATGGCGATGATGACAAGTACCCGGATCTCACACACACCCTTTTTGATTCTGAGGATTTGGATCTTGGAGGATCCGTGATTGACTTGGTGAAGAATTCAAAGGAAGAGGCAGGGAAAGAGTTTAAACTGGAGGATGAGATTGACTTTGCTGCTGACCTTTTCATCATGAAGTTCCGCAGGCAAATGGTGTTGCAGAAGCAAGAGTCATTCAAGAGGAAGAGGGAAATGCAGGAAAAGGGTGCATGA 603 0.4527 MKNRASRFLKQIISNLSSMAKSKTMALKSKTNAVRARLLIFSLMKNKRFLMSSLSEKFHSVWGNDSQSKDDCLLEEGSEESKAIVLYNNSHSYEALPNPSETLVVEEQDQECYEGYYNYDGDDDKYPDLTHTLFDSEDLDLGGSVIDLVKNSKEEAGKEFKLEDEIDFAADLFIMKFRRQMVLQKQESFKRKREMQEKGA* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1022 200 Pfam Cotton fibre expressed protein 163 195 IPR008480 -
Pvu1g1022 200 PANTHER EMB|CAB67623.1-RELATED 1 198 - -
Pvu1g1022 200 PANTHER COTTON FIBER PROTEIN 1 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1022 Pvu-Chr1 21872713 21873315 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1022 - - var:108328122 319.701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1022 1 21872713 21873315 Pvu1g1022 1 21872713 21873315 ECH
Pvu1g1022 1 21872713 21873315 Pvu4g0725 4 9706748 9707359 PCT