Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1021 ATGGATGAAGCACAATATTGGGTGGAAAAATCTTGTTCAACTTCTCGAAGAAGTTGTGAACAAGATTCTGAGGATGATCAAATCATTGCTCTCATGTTATCAAAAGAGTATGCCAAATTGGATGGAACACGACTTTCCAACTTTGCTCCTATTCCTCATGTGCCCCAAATAAACTCCTACATTAGAAATGTTATCATTGATCACCAACGTCTTCTTCATAGGTTAAACAAGCATGGTGTCTATGAGGTTGAAGTCTCTGCAGATGGAAACTGTCAGTTTCGTGCACTTTCAGATCAGCTTTTTAAGTCACCTGAGCACCACAAGCACGTTCGAAAAGAGATTGTAAAACAGCTCAAAGATCATCGTTCCTTATATGAGTGTTACGTACCAATGAAGTATAAACAATATTACAAGAAAATGGCCAAGTTTGGAGAATGGGGAGATCATGTTACCTTGCAAGCAGCTGCTGATAAGGTACAAACTATTTCCAGGCTAGTTTCTGCAAGCCATAAGTCAGTACTCCTGACCACACCACCAGCATCTGCACCAGCTATATTCAACCAACCAGAATCCATCCAACAACCATAA 588 0.4014 MDEAQYWVEKSCSTSRRSCEQDSEDDQIIALMLSKEYAKLDGTRLSNFAPIPHVPQINSYIRNVIIDHQRLLHRLNKHGVYEVEVSADGNCQFRALSDQLFKSPEHHKHVRKEIVKQLKDHRSLYECYVPMKYKQYYKKMAKFGEWGDHVTLQAAADKVQTISRLVSASHKSVLLTTPPASAPAIFNQPESIQQP* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1021 195 Gene3D - 63 186 - -
Pvu1g1021 195 ProSiteProfiles OTU domain profile. 80 177 IPR003323 -
Pvu1g1021 195 PANTHER OS04G0402300 PROTEIN 10 165 - -
Pvu1g1021 195 Pfam OTU-like cysteine protease 87 160 IPR003323 -
Pvu1g1021 195 PANTHER OTU DOMAIN CONTAINING PROTEIN 10 165 - -
Pvu1g1021 195 SUPERFAMILY Cysteine proteinases 64 161 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1021 Pvu-Chr1 21858630 21860936 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1021 - - gmx:100795801 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1021 1 21858630 21860936 Pvu1g1021 1 21858630 21860936 ECH