Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1009 ATGCCTACTGGTAGTAGAAATCCTCTTGTGGTTGGGCGTGTTATAGGAGAAGTAGTAGACCCCTTTGAAACTTCTATTCCTTTCAGGGTCTCCTATGGCAATAGAGAGGTCAACAATGGTTGTGAGCTTAAACCTTCCCAAGTTGCAAACCAACCCAGAGTTAGTGTTGGTGGAGATGATCTCAGGATCTTCTATACTCTGTTGTTAGTAGATCCTGATTCTCCCAGCCCAAGTAATCCCAATTCTAGAGAGTACCTTCATTGGTTGGTGACTGATATTCCAGCAACTACTGGGGCTAGTTTCGGTAACGAGGTTGTTAGTTATGAGAGCCCACGACCAACGATGGGGATTCATCGTTTGGTGTTTGTGTTGTTCCGTCAACAGTATCGACAGAGGGTGTATGCTCCTGGATGGCGACAGAATTTCAACACAAGAGAATTTGCTGAACTTTACAATCTTGGATTACCAGTTGCTGCAGTCTTCTTCAACTGTCAGAGGGAAACTGGTTCTGGTGGTAGGACATTTTGA 528 0.447 MPTGSRNPLVVGRVIGEVVDPFETSIPFRVSYGNREVNNGCELKPSQVANQPRVSVGGDDLRIFYTLLLVDPDSPSPSNPNSREYLHWLVTDIPATTGASFGNEVVSYESPRPTMGIHRLVFVLFRQQYRQRVYAPGWRQNFNTREFAELYNLGLPVAAVFFNCQRETGSGGRTF* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1009 175 CDD PEBP_euk 27 164 IPR035810 -
Pvu1g1009 175 Pfam Phosphatidylethanolamine-binding protein 64 159 IPR008914 -
Pvu1g1009 175 PANTHER PROTEIN FLOWERING LOCUS T-RELATED 6 174 - -
Pvu1g1009 175 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 6 174 IPR035810 -
Pvu1g1009 175 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 65 87 IPR001858 -
Pvu1g1009 175 Gene3D - 3 170 IPR036610 -
Pvu1g1009 175 SUPERFAMILY PEBP-like 13 167 IPR036610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1009 Pvu-Chr1 21455433 21457835 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1009 K16223 - gmx:100781509 325.865