Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0997 ATGACGGTATTCTCCGCCAAGCAGGTGTTCCCACTGGACTACGAGGCCGAAGTGTCGCAGCGTCTCCTCCATGCCTCGCACTCTGGCGATCTCCCCCTCGCCTTTCACTACATCGCCGATCCCTCCGTCGACGTCAACTTCGCCGGCGCCGTCACGTTGAAGACCTCCGTCACCAACCTCCTCCTCCTCCCGGAATCCCCCAGCCAAGTCCGCCTCGACTTCCAGGAATTCGTCTCGGACGTCACGCCGCTCTTCCTCGCTGTCCACGCTGCCAAGACCGACCTCGTCAGGAAGTTACTGAGTGTGGGAGCTGATGTAAATCAGAAACTCTTCAGAGGCTTTGCAACTACTGCAGCGGTGAGGGAAGGTCACTGTAAAATTCTTGAGATGATACTTAAAGCAGGGGCATCGCAACCAGCATGTGAAGAAGCTCTTATAGAGGCAAGTTTCCATGGCCACGCAGGGTGTGTAGAATTGCTTATGAGCTCTGATTTGATCCGCCCTCAGGTTGCTATACATGCTCTTGTGACCGCAAGCTGCAGGGGTTTTGTAGACGTGGTTGAGACGCTCATAAAGTGTGGTGTGGATGTGAGTGCAACAGACCGGGTACTTTTACAGTCACTTAAGCCTTCTCTGCACACAAATGTGGATTGTACAGCGCTCGTTGCAGCTGTAATTCATAGACAGGTCCCTGTAGTTGATTTGCTACTGCAGAATGGTGCTAGGATAGACCTCAAAGTGAGACTTGGAGCATGGTCATGGGACACTTCCTCTGGTGAGGAGCTTCGTGTGGGTGCTGGCCTAGGAGAACCTTATGGAATCACCTGGTGTGCAGTTGAGTATTTTGAAAGAAGTGGTTCTATACTACGGAAGCTCCTGCAGCATGTTTCCTCCGAACCTCATTGTGGAAGAACCCTTCTACACCATGCCATACTCTGTGGCAATGTTGAGGCTGTTAAGGTGCTCTTAGAATGTGGTGCAGATGTCGAATCCCCTGTTAAAACAACCAGCAAGACTCAGTTCCTTCCTATACACATGGCGTCCCGTCTAGGCTTACCCACAGCTATTCAATGTCTTATTGATTTTGGTTGTGATTTGAGCTCCAGAACAGACTCTGGTGACACAGCTTTGATGATCTGTGCAAAATATAAGCAAGATGAGTGTCTCAAAGTACTAACAAGGGCTGGTGCTGATTTTGGCTTGGTGAATATTGCTGGTCAATCTGCAAGTTCAATCGCCGAGTCAAACAAGTGGTCACTTGGTTTTCAACAAGCAGTGTTGGATACAATCAAAAGCAGCAAGATACCTAAATCGAGCAATACTTCCACTTTCTCACCTTTAATATTTGTAGCTCAAGCTGGAGATACTGAAGCATTGAAAATTGTAGTTGAATCTGGAGAATTTGATCTTGACTATCAAGATGATAGTGGTTTCTCTGCAGTTATGCACGCTGCTTCAAAGGGGGACGTAGATTCTTTTCGATTGCTGGTATATGCTGGATCTGATGTGAAATTGTGCAATAAATCTGGTGAAACAGCAATAGCCCTATCTGAAATGAATCAGAATTGTGATCTAATCGAAAAGGTCATGCTTGAATATGAGCTTGAAAAGGGCAATATCAATGCTTCTGGATTCTACGCATTACATCGCGCAGCTCGTCGCGGTGACTTGGATGCCGTCATATTGCTCACCAGCAAAGGTTATGATGTCAATGCCCCCGATGGGGAGCACTTTAGTCCACTCATGCTATCAGCAAGGGAAGGCCATGCGTCCATTTGCGAGCTTCTAATCTCATGTGGTGCTCATTGTAATGCTAAAAATGCTCGAGGGGAAACTGCACTTTCTATAGCAAGGAAATTCGCAGGAGGTAAAAACGATGCAGAGGATGTTATACTCGATGAACTTGCTCGTAAATTGGTATTAGGTGGTTCCTGTGTTCTGAAGCATACCAAAAGTGGGAAGGGTTCTCCCCATGGGAAACAAATGCGGATGTTGGGATCTGGTGGTGTGCTGTGTTGGGGAAAATCAAGCCGGAGAAATGTGATTTGCTGTGAGGCAGAGTTAGGAGGAAGCTCAACATTACGTAGAAATAGGTACAAGAAAGGTGATGCAGATGAAGCTGGAATGTTTAGGATCCTTACTGACAAGAACAGGGAAGTGCATTTTGTATGTGATGGAGGGTTAGAAGGCGCTGAGCTTTGGGTGAGGGGTATTAAACTTGTAACCAAAGAGGCTAATCTTCACAAGCAGAAATCAGTGTAA 2262 0.4717 MTVFSAKQVFPLDYEAEVSQRLLHASHSGDLPLAFHYIADPSVDVNFAGAVTLKTSVTNLLLLPESPSQVRLDFQEFVSDVTPLFLAVHAAKTDLVRKLLSVGADVNQKLFRGFATTAAVREGHCKILEMILKAGASQPACEEALIEASFHGHAGCVELLMSSDLIRPQVAIHALVTASCRGFVDVVETLIKCGVDVSATDRVLLQSLKPSLHTNVDCTALVAAVIHRQVPVVDLLLQNGARIDLKVRLGAWSWDTSSGEELRVGAGLGEPYGITWCAVEYFERSGSILRKLLQHVSSEPHCGRTLLHHAILCGNVEAVKVLLECGADVESPVKTTSKTQFLPIHMASRLGLPTAIQCLIDFGCDLSSRTDSGDTALMICAKYKQDECLKVLTRAGADFGLVNIAGQSASSIAESNKWSLGFQQAVLDTIKSSKIPKSSNTSTFSPLIFVAQAGDTEALKIVVESGEFDLDYQDDSGFSAVMHAASKGDVDSFRLLVYAGSDVKLCNKSGETAIALSEMNQNCDLIEKVMLEYELEKGNINASGFYALHRAARRGDLDAVILLTSKGYDVNAPDGEHFSPLMLSAREGHASICELLISCGAHCNAKNARGETALSIARKFAGGKNDAEDVILDELARKLVLGGSCVLKHTKSGKGSPHGKQMRMLGSGGVLCWGKSSRRNVICCEAELGGSSTLRRNRYKKGDADEAGMFRILTDKNREVHFVCDGGLEGAELWVRGIKLVTKEANLHKQKSV* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0997 753 Gene3D - 12 170 IPR036770 -
Pvu1g0997 753 ProSiteProfiles Ankyrin repeat region circular profile. 302 330 - -
Pvu1g0997 753 Gene3D - 423 532 IPR036770 -
Pvu1g0997 753 SUPERFAMILY Ankyrin repeat 81 416 IPR036770 -
Pvu1g0997 753 Coils Coil 516 536 - -
Pvu1g0997 753 ProSiteProfiles Ankyrin repeat profile. 543 575 IPR002110 GO:0005515
Pvu1g0997 753 Gene3D - 533 633 IPR036770 -
Pvu1g0997 753 ProSiteProfiles Ankyrin repeat region circular profile. 79 107 - -
Pvu1g0997 753 Gene3D - 281 422 IPR036770 -
Pvu1g0997 753 Gene3D - 171 256 IPR036770 -
Pvu1g0997 753 ProSiteProfiles Ankyrin repeat region circular profile. 543 574 - -
Pvu1g0997 753 ProSiteProfiles Ankyrin repeat profile. 302 334 IPR002110 GO:0005515
Pvu1g0997 753 ProSiteProfiles Ankyrin repeat profile. 476 508 IPR002110 GO:0005515
Pvu1g0997 753 Pfam Ankyrin repeats (3 copies) 520 607 IPR002110 GO:0005515
Pvu1g0997 753 Pfam Ankyrin repeats (3 copies) 281 330 IPR002110 GO:0005515
Pvu1g0997 753 ProSiteProfiles Ankyrin repeat profile. 576 608 IPR002110 GO:0005515
Pvu1g0997 753 PANTHER ANKYRIN DOMAIN PROTEIN 5 746 - -
Pvu1g0997 753 Pfam Ankyrin repeats (many copies) 446 497 IPR002110 GO:0005515
Pvu1g0997 753 PANTHER ANKYRIN REPEAT-CONTAINING 5 746 - -
Pvu1g0997 753 ProSiteProfiles Ankyrin repeat profile. 79 111 IPR002110 GO:0005515
Pvu1g0997 753 SMART ANK_2a 140 169 IPR002110 GO:0005515
Pvu1g0997 753 SMART ANK_2a 476 505 IPR002110 GO:0005515
Pvu1g0997 753 SMART ANK_2a 442 472 IPR002110 GO:0005515
Pvu1g0997 753 SMART ANK_2a 543 572 IPR002110 GO:0005515
Pvu1g0997 753 SMART ANK_2a 79 108 IPR002110 GO:0005515
Pvu1g0997 753 SMART ANK_2a 216 245 IPR002110 GO:0005515
Pvu1g0997 753 SMART ANK_2a 372 401 IPR002110 GO:0005515
Pvu1g0997 753 SMART ANK_2a 576 605 IPR002110 GO:0005515
Pvu1g0997 753 SMART ANK_2a 302 331 IPR002110 GO:0005515
Pvu1g0997 753 SMART ANK_2a 170 199 IPR002110 GO:0005515
Pvu1g0997 753 SMART ANK_2a 339 368 IPR002110 GO:0005515
Pvu1g0997 753 ProSiteProfiles Ankyrin repeat region circular profile. 576 607 - -
Pvu1g0997 753 SUPERFAMILY Ankyrin repeat 296 617 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0997 Pvu-Chr1 21133961 21142953 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0997 366 563 Miscellaneous Gene Families AT1G07710 25.121 3.97e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0997 - - gmx:100809132 1309.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0997 1 21133961 21142953 Pvu1g0997 1 21133961 21142953 ECH