Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0994 ATGAGTTCCTCTGCAACAGACGATAACCCAAGATCCGTAAAAAGAGTTGCTGTTATTGGTGCTGGGGTAAGTGGGCTTGCTGCCGCTTACAAACTGAAATCACATGGTCTGGATGTCACTGTATTTGAAGCTGAAGGAAGAGCTGGAGGGAGGTTGAGAAGTGTTTCTCGGGATGGTCTAATTTGGGATGAGGGAGCTAATACAATGACTGAAAGTGAAACTGAGGTTAAAGGTCTGATTGATGCTCTTGGACTTCAAGAAAAGCAGCAATTTCCAATATCCCAGCATAAGCGCTATATTGTGAAAAATGGGGCACCGGTGCTGGTCCCCACAAATCCTGCAGCACTACTGAAGAGTAAACTACTTTCTGCACAATCAAAGCTTCTTGAGATTTCAAATATTTTCATTATCAATGAATGCTTTTCTATTTCATTAATGATACTTACAACTTCTCACCCTCACAATAATGGATTTATGCTATTAGAGATATGA 492 0.4085 MSSSATDDNPRSVKRVAVIGAGVSGLAAAYKLKSHGLDVTVFEAEGRAGGRLRSVSRDGLIWDEGANTMTESETEVKGLIDALGLQEKQQFPISQHKRYIVKNGAPVLVPTNPAALLKSKLLSAQSKLLEISNIFIINECFSISLMILTTSHPHNNGFMLLEI* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0994 163 Pfam Flavin containing amine oxidoreductase 23 131 IPR002937 GO:0016491
Pvu1g0994 163 PRINTS Adrenodoxin reductase family signature 15 37 - -
Pvu1g0994 163 PRINTS Adrenodoxin reductase family signature 38 51 - -
Pvu1g0994 163 PANTHER PROTOPORPHYRINOGEN OXIDASE 12 126 - -
Pvu1g0994 163 PANTHER PROTOPORPHYRINOGEN OXIDASE 12 126 - -
Pvu1g0994 163 SUPERFAMILY FAD/NAD(P)-binding domain 14 128 IPR036188 -
Pvu1g0994 163 Gene3D - 1 148 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0994 Pvu-Chr1 20959346 20961675 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0994 15 65 Acyl Lipid Metabolism Gene Families AT3G23510 44.231 5.36e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0994 K00231 - pvu:PHAVU_001G095900g 306.605