Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0983 ATGGCTCTTCAAGGTTCAATGTCTTTTGCTGCTTTCACTCTTTTCTTGGTCCTCACAACAGTCTCTCATGGCAGAAATATCAACCCTCCCGTGTATGGTATATGTTCCTCTTCTGTCATTCTGCATGGATACAAGTGCCAAGAACACGAGGTTACAACCAATGATGGATATATTCTGAGTGTGCAAAGGATCCCAGAAGGTCGTGCTAATGGCAGTGGTAGCAGAACCAGGAAACAACCAGTGATCATACAACACGGAGTTCTAGTGGATGGTATGACATGGCTTCTGAACCCTCCAGAGCAAGACCTACCTTTGATTTTAGCTGATAATGGCTTTGACGTTTGGATTGCTAACAGCAGAGGAACCAGATTTAGCCGCCGACACATCTCATTGGACCCCTCTAGCCCGGCCTTTTGGAATTGGTCTTGGGATGAACTTGTCTCCTATGATCTACCAGCCATCTTTAATTATGTATTCACCCAAACGCAGCAGAAGATCAATTACGTTGGCCATTCCTTGGGAACTTTGACAGCTTTAGCATCCTTTTCCGAAGGGAAATTGGTTAACCAGCTGAAATCAGCAGCCTTGTTGAGCCCTATAGCGTATTTAAGCCACATGAACACAGCACTTGGTGTTATTGCAGCTAAGTCCTTCGTTGGTGAGGTCACTACCCTCTTCGGTCTGGCAGAATTCAATCCAAAAGGGTTACCTGTTGATGCCTTCCTCAAGTCTCTCTGCGCTTACCCTGGGATAGACTGCTATGACTTGATCACTGAACTAACTGGTAAAAATTGCTGCCTCAATTCTTCTACTGTTGATATATTCTTGAGGAATGAACCTCAGTCAACATCAACAAAGAATATGGTGCACTTGGCTCAGACTGTAAGACGTGGGGTGTTGACAAAATTTAATTATGTGAGACCAGATTATAATATTATGCATTACGGAGACGTATTCCCTCCTATCTACAACCTTTCCAATATCCCTCATGACCTTCCTCTCTTCATTAGCTATGGTGGCAGAGATGCACTTTCAGATGCTCGAGATGTTCAGAATTTACTTGATAACCTCAAGTTCCATGATGTGGACAAGCTCAGTGTCCAGTTCATCAAGGAATATGCTCACGCTGACTACGTGATGGGGTTCAATGCCAAGGACTTTGTATACAATGCTGTTATTTCATTTTTCAATCATCAAGTTAACACTTGA 1209 0.4342 MALQGSMSFAAFTLFLVLTTVSHGRNINPPVYGICSSSVILHGYKCQEHEVTTNDGYILSVQRIPEGRANGSGSRTRKQPVIIQHGVLVDGMTWLLNPPEQDLPLILADNGFDVWIANSRGTRFSRRHISLDPSSPAFWNWSWDELVSYDLPAIFNYVFTQTQQKINYVGHSLGTLTALASFSEGKLVNQLKSAALLSPIAYLSHMNTALGVIAAKSFVGEVTTLFGLAEFNPKGLPVDAFLKSLCAYPGIDCYDLITELTGKNCCLNSSTVDIFLRNEPQSTSTKNMVHLAQTVRRGVLTKFNYVRPDYNIMHYGDVFPPIYNLSNIPHDLPLFISYGGRDALSDARDVQNLLDNLKFHDVDKLSVQFIKEYAHADYVMGFNAKDFVYNAVISFFNHQVNT* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0983 402 Pfam Partial alpha/beta-hydrolase lipase region 40 97 IPR006693 GO:0006629
Pvu1g0983 402 SUPERFAMILY alpha/beta-Hydrolases 41 397 IPR029058 -
Pvu1g0983 402 PANTHER TRIACYLGLYCEROL LIPASE 2 28 399 - -
Pvu1g0983 402 Gene3D alpha/beta hydrolase 25 398 IPR029058 -
Pvu1g0983 402 PIRSF Steryl_ester_lip 2 401 IPR025483 GO:0016788
Pvu1g0983 402 PANTHER LYSOSOMAL ACID LIPASE-RELATED 28 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0983 Pvu-Chr1 20613969 20619206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0983 9 402 Acyl Lipid Metabolism Gene Families AT2G15230 36.020 4.70e-90 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0983 K01052 - gmx:100779460 729.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0983 1 20613969 20619206 Pvu4g0592 4 7096439 7098713 PCT