Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0976 ATGATCTATTATGATATGACCAGAAAAAAAGCATTACCTGTCTCAACCTTTGTTAGTGGCTTTTGTTTCAGTCATAGTGCGAAAAAGATGAGAGTTGTGGAGTTATCACCCTCAGGTGGCAATGGTTCCTCTACTACTGAAGATGAACCTTTACCTCAGGATGCAGATTATAGTAATGTTCTGACTATTAGTGACGAGCTAGAGACTTCAATCTTGGCAAGATTTCCAAGGTCACAGCATTGGAAATTGTGCTCTCTAAACAAGCGGTTCTTGGGGCTAGCGAGGAGTGGCGAGATCTACAAAATCAGGAAAGAGTTGGGACTGAAAGAACCATCTGTGTTTATGTTAGCTAGTGGAGAAAGCAATTGGTGGGGAATGGAGTGGCCTTTCATGTCAAGCAGGAAGCTCCCTCCTATTCAATCAGATTATAATTTTGAGTTTGGAGACAAGGAGTCATTCTGTGCAGGATCCCACCTATTAGTCTCAGGCAAGGAGATTGATGGGGCTGTAACTTGGAGGTTTGATTCAACAAATAATGAATGGCTCAAAGGGCCATCTATGATAAACCCAAGGTGTCTTTTTGCATCAGCCACATCTGGTGCTATTGCTTTTGTTGCTGGGGGTGATGATGCAACATACACCCAAGTTTTGGATTCTGCTGAGATGTACAACTCTGAAAGCCAGCGTTGGAAGCCCCTACCAAGGATGAACAAAAGGAGGAGGTTTTGCTCAGGTTGCTTCATGGATAGCAAGTTCTATGTCCTTGGAGGGCGAGATGAGCATAAGAGGAACCTCACTTGTGGCGAATTCTTTGATGGGAAGACAAACAGTTGGAACTTGATTCCTGACATGTGGAAGGGTATTCCTCTTTTTGATTCACAGTCTCCACCTCTTCTTGCTGTTGTCAACAATGAGTTGTACACACTGGATGCTTCTTCAAATGAGCTGAAAGCGTATATGAAGGGAAGCAATTCATGGAAAACTTTGGGAGTGGTTCCTGTGAGAGCTGATGCACAAAGAGGTTGGGGTGTGGCTTTTAAATCTCTTGGTGATGAGTTGCTTGTGATTGGTGCACCTTCTGTGCCACACAGAGAGCGAGCCATGTGTATGTACACTGGTTCTCCTGATCCTGCTGGTGAGAAATTCAGGTGGAGGCAAATTGGATGTAGCAGCATTCAGCTCAGTCACTTTATCCGCAATTGTGCTGTGATGTGGACCTGA 1221 0.4439 MIYYDMTRKKALPVSTFVSGFCFSHSAKKMRVVELSPSGGNGSSTTEDEPLPQDADYSNVLTISDELETSILARFPRSQHWKLCSLNKRFLGLARSGEIYKIRKELGLKEPSVFMLASGESNWWGMEWPFMSSRKLPPIQSDYNFEFGDKESFCAGSHLLVSGKEIDGAVTWRFDSTNNEWLKGPSMINPRCLFASATSGAIAFVAGGDDATYTQVLDSAEMYNSESQRWKPLPRMNKRRRFCSGCFMDSKFYVLGGRDEHKRNLTCGEFFDGKTNSWNLIPDMWKGIPLFDSQSPPLLAVVNNELYTLDASSNELKAYMKGSNSWKTLGVVPVRADAQRGWGVAFKSLGDELLVIGAPSVPHRERAMCMYTGSPDPAGEKFRWRQIGCSSIQLSHFIRNCAVMWT* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0976 406 SUPERFAMILY Kelch motif 153 359 IPR015915 GO:0005515
Pvu1g0976 406 SMART kelc_smart 158 201 IPR006652 GO:0005515
Pvu1g0976 406 SMART kelc_smart 202 250 IPR006652 GO:0005515
Pvu1g0976 406 Pfam Kelch motif 190 237 IPR006652 GO:0005515
Pvu1g0976 406 Pfam Kelch motif 239 284 IPR006652 GO:0005515
Pvu1g0976 406 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 6 405 - -
Pvu1g0976 406 MobiDBLite consensus disorder prediction 37 53 - -
Pvu1g0976 406 MobiDBLite consensus disorder prediction 34 53 - -
Pvu1g0976 406 Gene3D - 105 382 IPR015915 GO:0005515
Pvu1g0976 406 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 6 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0976 Pvu-Chr1 20449783 20451454 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0976 61 281 Miscellaneous Gene Families AT4G33900 25.551 1.92e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0976 - - gmx:100777338 709.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0976 1 20449783 20451454 Pvu1g0976 1 20449783 20451454 ECH