Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0959 ATGCTGTCTTGTGTAACAGAAAATATGGGCTTACTCTGTAGCAGAAACCGGCGTTATAATGATGCTGATGCTGAAGAAAATGCACAGACTGCAGAGATTGAAAGAAGAATAGAATTGGAAACAAAGGCTGAAAAGCACATTCAGAAACTTCTACTACTTGGAGCTGGAGAGTCAGGGAAATCCACAATATTTAAGCAGATAAAACTTTTGTTTCAAACTGGCTTTGACGAGGCAGAACTAAAAAGCTACTTACCAGTCATTCATGCTAATGTGTATCAGACAATAAAATTACTGCATGATGGATCAAAGGAGTTTGCCCAGAATGATGCTGATTTTTCAAAGTATGTTATATCCAATGTAAATAAGGAAATTGGGGAAAAGTTATCCGAAATCGGAGGCAGGCTAGATTACCCACATCTCACAAAGGAACTTGCACAGGAAATTGAAAATCTGTGGAAGGATCCTGCAATTCAGGAGACATATGCCCGTGGTAGTGAGCTTCAAATTCCAGATTGTACTGATTATTTCATGGACAATTTGCAAAGGTTGTCTGATGCAAACTATGTTCCAACAAAGGAGGATGTTTTGTATGCTAGAGTGCGTACGACTGGGGTTGTAGAGATCCAGTTCAGTCCTGTTGGGGAAAATAAAAAAAGTGGTGAAGTCTACAGACTCTTTGATGTTGGTGGCCAGAGAAATGAGAGGAGAAAGTGGATCCATTTGTTTGAAGGAGTTTCAGCTGTAATATTCTGTGCTGCAATTAGCGAGTATGATCAAACACTTTTTGAGGACGAAAACAGAAACAGAATGATGGAGACTAAGGAACTTTTTGAGTGGGTCCTGAAGCAACCATGTTTTGAGAAAACATCCTTCATGTTATTCTTAAACAAGTTTGACATATTTGAGAAGAAGATCTTGAAAGTCCCACTTAATGTATGTGAATGGTTCAAAGATTACCAACCTGTTTCAACAGGAAAACAAGAGATTGAGCATGCATACGAGTTTGTGAAGAAAAAATTCGAGGAATCATATTTCCAGAGCACTGCTCCTGATCGTGTAGATCGTGTCTTTAAGATCTACAGGACCACTGCCCTTGATCAGAAGGTTGTGAAGAAGACTTTCAAGCTTGTTGATGAGACTTTGAGGCGGAGAAATCTGTTTGAAGCTGGCTTGTTATGA 1179 0.3927 MLSCVTENMGLLCSRNRRYNDADAEENAQTAEIERRIELETKAEKHIQKLLLLGAGESGKSTIFKQIKLLFQTGFDEAELKSYLPVIHANVYQTIKLLHDGSKEFAQNDADFSKYVISNVNKEIGEKLSEIGGRLDYPHLTKELAQEIENLWKDPAIQETYARGSELQIPDCTDYFMDNLQRLSDANYVPTKEDVLYARVRTTGVVEIQFSPVGENKKSGEVYRLFDVGGQRNERRKWIHLFEGVSAVIFCAAISEYDQTLFEDENRNRMMETKELFEWVLKQPCFEKTSFMLFLNKFDIFEKKILKVPLNVCEWFKDYQPVSTGKQEIEHAYEFVKKKFEESYFQSTAPDRVDRVFKIYRTTALDQKVVKKTFKLVDETLRRRNLFEAGLL* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0959 392 Gene3D - 76 201 IPR011025 GO:0007165
Pvu1g0959 392 CDD G-alpha 48 386 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Pvu1g0959 392 PRINTS Alpha G protein (transducin) signature 49 64 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Pvu1g0959 392 PRINTS Alpha G protein (transducin) signature 188 210 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Pvu1g0959 392 PRINTS Alpha G protein (transducin) signature 223 240 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Pvu1g0959 392 PRINTS Alpha G protein (transducin) signature 245 273 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Pvu1g0959 392 PRINTS Alpha G protein (transducin) signature 291 300 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Pvu1g0959 392 PANTHER GUANINE NUCLEOTIDE-BINDING PROTEIN ALPHA-1 SUBUNIT 9 392 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Pvu1g0959 392 SUPERFAMILY Transducin (alpha subunit), insertion domain 75 200 IPR011025 GO:0007165
Pvu1g0959 392 Gene3D - 49 380 IPR027417 -
Pvu1g0959 392 ProSiteProfiles G-alpha domain profile. 46 392 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Pvu1g0959 392 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 9 392 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Pvu1g0959 392 SMART galpha_1 27 391 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Pvu1g0959 392 PRINTS Plant G protein alpha subunit signature 35 44 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Pvu1g0959 392 PRINTS Plant G protein alpha subunit signature 85 98 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Pvu1g0959 392 PRINTS Plant G protein alpha subunit signature 100 114 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Pvu1g0959 392 PRINTS Plant G protein alpha subunit signature 124 138 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Pvu1g0959 392 PRINTS Plant G protein alpha subunit signature 208 223 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Pvu1g0959 392 PRINTS Plant G protein alpha subunit signature 278 289 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Pvu1g0959 392 PRINTS Plant G protein alpha subunit signature 327 342 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Pvu1g0959 392 PRINTS Plant G protein alpha subunit signature 344 356 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Pvu1g0959 392 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 389 IPR027417 -
Pvu1g0959 392 Pfam G-protein alpha subunit 30 380 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0959 Pvu-Chr1 19186038 19194055 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0959 K19729 - gmx:547977 766.148