Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0948 TCGGATAGAGAGTTCCTCTATCAAATATTTGGAGATGTTATCGAAGCTGGGGCAACAACTGTGGTGGTAGCAGACACTGTGGGCATAACAATGCCATTCGAGTTTGGAAAACTGATTGCTGATATAAAAGCCAATACCCCTGGAATTGAAAAGGCTATTATCGCGGTTCACTGTCATAATGATCTTGGACATGCTACTGCAAACACAATAGAGGCTACACGTGCTGGCGCAAGGCAATTAGAAGTAACAGTTAATGGGATTGGTGAAAGGGCTGGTAATGCTGCATTAGAAGAGGTTGTGATGGCCCTAAGATGCAGGGGAGATCATGTTTTAGGTGGTTTATATACTGGAATTAATACAAAGCACATCCTGAAGACCAGCAAGATGGTTGAAGAGTGCTCGGGTATGCATTTACAGCCACACAAAGCTATTGTAGGTCATAATGCATTTCTCCATGAAAGTGGAATTCATCAGGATGGATTGTTAAAGCATAGAGGCACATATGAAATACTTTCTCCAGAAGATATTGGTTATGAAAGGTCCAATGAAGCTACTATGGTACTAGGGAAGCTAAGTGGACGCCATGCTTTGAAAACCCGACTTAAAGAGCTTGGTTATGAACTCAAGGAGGATGAAGTTGAGAGTGTATTTCAAAACTTCAAAGCAATGGCCGAGAAAAAAAAGAGAGTTACCGATGTTGACCTTAAAGCATTGGTATCAGATCAAGTTTGTGATGTAGAACCTATTTGGAAGCTTTGTGGGTTGGAGGTGACTTGTGGAACTATGAATTTTTCATCAACAACTATTGAACTTGTTACAATTAACGGTACCACACACGTTGCTTGTTCCGTTGGAAAAGGACCAGTGGATTCAGCGTTTAAGGCTGTCGATCTCATTGTGAAGGAAGCTGTGAAAGTACTTGAGTACTCACTAAATACAATCACAGAAGGCACTGATGCAATTGCAACTGTACATGTTGTAATTCATAAAGAGAATGCGCACTCATATAATTCTACTGGAAACATTGTTTATCCCACATTTAGTGGGATTGGAAAAGGAGTAGATGTTGTTGTTTCCAGTGTAGAGGCTTATCTTACTGCACTAAACAAAATGCTCGATTTCAAGGAATGA 1131 0.405 SDREFLYQIFGDVIEAGATTVVVADTVGITMPFEFGKLIADIKANTPGIEKAIIAVHCHNDLGHATANTIEATRAGARQLEVTVNGIGERAGNAALEEVVMALRCRGDHVLGGLYTGINTKHILKTSKMVEECSGMHLQPHKAIVGHNAFLHESGIHQDGLLKHRGTYEILSPEDIGYERSNEATMVLGKLSGRHALKTRLKELGYELKEDEVESVFQNFKAMAEKKKRVTDVDLKALVSDQVCDVEPIWKLCGLEVTCGTMNFSSTTIELVTINGTTHVACSVGKGPVDSAFKAVDLIVKEAVKVLEYSLNTITEGTDAIATVHVVIHKENAHSYNSTGNIVYPTFSGIGKGVDVVVSSVEAYLTALNKMLDFKE* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0948 376 Gene3D - 260 372 IPR036230 -
Pvu1g0948 376 Pfam HMGL-like 2 130 IPR000891 GO:0003824
Pvu1g0948 376 ProSiteProfiles Pyruvate carboxyltransferase domain. 1 124 IPR000891 GO:0003824
Pvu1g0948 376 PANTHER HOMOCITRATE SYNTHASE-RELATED 1 375 - -
Pvu1g0948 376 ProSitePatterns Alpha-isopropylmalate and homocitrate synthases signature 2. 54 67 IPR002034 GO:0019752|GO:0046912
Pvu1g0948 376 Gene3D - 138 254 - -
Pvu1g0948 376 Pfam LeuA allosteric (dimerisation) domain 230 372 IPR013709 GO:0003852|GO:0009098
Pvu1g0948 376 Gene3D Aldolase class I 1 136 IPR013785 -
Pvu1g0948 376 SMART LeuA_dimer_2 229 372 IPR013709 GO:0003852|GO:0009098
Pvu1g0948 376 PANTHER 2-ISOPROPYLMALATE SYNTHASE 1, CHLOROPLASTIC 1 375 - -
Pvu1g0948 376 SUPERFAMILY Aldolase 2 148 - -
Pvu1g0948 376 SUPERFAMILY 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 271 371 IPR036230 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0948 Pvu-Chr1 18309755 18317214 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0948 K01649 - gmx:100797422 595.119