Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0939 ATGTACGTGGTGCCGCCGCCGCAGCGCTCCGATCAGGAGTCAGGATCCGGAGATTTCCGGGTCTATCAAGCTTGGAAGGGTAGCAATAAATTTTTTCTTCAGGGAAGGTTCATATTTGGACCAGATGTGAGATCACTGGCGCTGACAATTTTTCTTATTGTTGCTCCTGTCGCATTTTTCTGTGTCTTTGTTGCCAGAAAACTGATGGATGCTTTTTCTGACCACTGGGGGATATCCATAATGGCTGTTGCTGTTGTGTTCACAGTTTATGTCTTAGTTCTTCTTTTGTTAACATCTGGTCGAGATCCAGGCATAATTCCACGCAATGCACATCCTCCGGAGCCAGAAGGTTTGGACAGTAATCTAGATGTTAGTGCAGGTCAGACTCCTCAATTGCGGTTGCCTCGCTTTAAGGAGGTTGAGGTCAATGGCATCCCTATTAAGGTCAAGTATTGCGATACTTGCATGCTCTACAGACCTCCTCGATGCTCACACTGCTCCATTTGTAATAATTGTGTGGAACGGTTTGATCATCACTGTCCTTGGGTTGGACAGTGTATTGGACTGCGTAATTATCGGTTCTTCTTCATGTTTGTCTTCTCAACTACGCTACTCTGTATATATGTTTTTGCGTTTTGCTGGGTCTATATTATAAGAATTATGGCGGCAGAAGAGACAACAATTTGGAAGGCAATGATAAAAACTCCAGCCTCCATAGTGTTAATAATTTACACCTTTATATCAATGTGGTTTGTGGGCGGCCTCACCGCCTTCCACTTATATTTGATCAGTACCAATCAGACTACTTATGAAAACTTCAGATACCGATATGATCGGCGAGCCAATCCATATAACAAAGGAGTGTTGAATAATTTCAAAGAGATATTCTGCATCAGCATTCCCCTGTCAAAGAACAAGTTCAGGGCAACAGTGCCAAAAGAACCAGCATTACCTACTCGATCAGTGGGTGGAAGCTATATGAACCAAAACATGGGGAAAGTTGGGGAGGACATAGAGATGGGAAGAAAAACAGTATGGGAGATGGGTGCTGGAATTGATGATTCTGAAGCTGGATTAAGCAATGATCGTGTGAATGTAAAGGATGGTGAATTGTCTCCTGAAATGAGGACCACAGTTGATGACACAGACCGTGCCGGAATGCATCCTAGGCGATCTAGCTGGGGAAGAAAAAGTGGAAGCTGGGAAATGTCCCCTGAAGTTTTGGCTTTGGCAGCCAGGGTAGGGGAACCAAACCGTGTGGGTGGAAACAGCAGTAGTAGTTTGACACAAGATAATCGTCATGTGTAG 1308 0.4434 MYVVPPPQRSDQESGSGDFRVYQAWKGSNKFFLQGRFIFGPDVRSLALTIFLIVAPVAFFCVFVARKLMDAFSDHWGISIMAVAVVFTVYVLVLLLLTSGRDPGIIPRNAHPPEPEGLDSNLDVSAGQTPQLRLPRFKEVEVNGIPIKVKYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRFFFMFVFSTTLLCIYVFAFCWVYIIRIMAAEETTIWKAMIKTPASIVLIIYTFISMWFVGGLTAFHLYLISTNQTTYENFRYRYDRRANPYNKGVLNNFKEIFCISIPLSKNKFRATVPKEPALPTRSVGGSYMNQNMGKVGEDIEMGRKTVWEMGAGIDDSEAGLSNDRVNVKDGELSPEMRTTVDDTDRAGMHPRRSSWGRKSGSWEMSPEVLALAARVGEPNRVGGNSSSSLTQDNRHV* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0939 435 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 12 432 - -
Pvu1g0939 435 MobiDBLite consensus disorder prediction 360 390 - -
Pvu1g0939 435 ProSiteProfiles DHHC domain profile. 150 200 - -
Pvu1g0939 435 Pfam DHHC palmitoyltransferase 149 274 IPR001594 GO:0016409
Pvu1g0939 435 MobiDBLite consensus disorder prediction 419 435 - -
Pvu1g0939 435 MobiDBLite consensus disorder prediction 357 435 - -
Pvu1g0939 435 PANTHER S-ACYLTRANSFERASE 12 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0939 Pvu-Chr1 16924317 16930819 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0939 79 296 Lipid Metabolism Gene Families AT4G22750 27.753 1.59e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0939 - - gmx:100810894 814.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0939 1 16924317 16930819 Pvu4g0768 4 10818219 10827175 PCT