Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0934 ATGGGTAGCACATTTAATCCACAAATTTTAGTGGAAAAACTAGCCAAGCTGAATGGTTCCCAAACGAGCATAGAGACTTTGTCACATTGGTGTATTTTTCATATGAACAAAGCCAAACAAGTTGTTGAAACATGGGATAGGCAATTTCATGGTTCTCCACGTGAGAAGAGATTGGCATTTCTGTATCTTGCAAATGATATTTTACAGAACAGCAGGCGAAAAGGATCTGAATTTGTAGGTGAATTCTGGAAGGTTCTTCCAGATGCTCTCCGAGATGTGATTCAAAATGGAGATGATTTTGCTAGGAATGCGGCACTTCGACTGATTGTTATATGGGAAGAGAGGAAAGTCTTTGGTTCTCGTGGTCAAATTCTTAAGGAAGAATTTGTCGGTAGGAATGTGGAAAACACTACTCGAGATGTGAAGCCTACAAACATGAAACTGAGGCCATCTTCAGGGAATGCATTGGAGAAAATAGTTTCAGCTTTTCATGTTGTTTATGGAGGGCAAAAAGATGAAGACGCCATATTGAGCAAATGCAGTAATGCCATTAACTGTCTTGACAAAGCAGATAAAGAAATAGTTTCAGGGCAATTTGGTGGATCCGCACTGGTGGATGAGCTCCAGGGGCATAATGCTGTACTGAAGGACTGCATTGAGCAGTTAACAGCCATAGAGTCATCTAGAACTAGTCTCGTGTCTCAGTTGAGAGAAGCTCTTGAAGATCAGGAATTCAAGCTGGGTCAAGTCCGTAGCCAGATTCAGGCTGCAAATGTACGGTCAGATCGGGCGTCCAACAACTGCCAACAGTTACTTAATGGCAACAACATTCAGTCAATAGCTGAGCAGAGCTCAAAGGAAATTCAAACCTCCATGTCATCTGCAAGTTTTAGTATTTCTCGTGAAAGGGAGCAATCTGCTCCATTAATGTACACACCACAAGTGTCATTTTCTCAGAAATCTGGACAGGTTGAGGAAGATCCACGCAAATCTGCAGCTGCTGCAGTAGCAGCAAAACTTACTGCTTCAACATCCTCCGCGCAGATGCTATCATATGTGCTGTCCTCCCTAGCATCAGAAGGTGTCATAGGCAATCAGTCTTCAGCTGATTATCACTCAGAGAAGAGGACCAAGCTCGAGAATGACCAACCATCTTTTATGCCATCTCAGAATCCTCAACAACCACTTCCTCCCTTCTCTCTACCTGAGTCTATTCAACACAATGCTCCTACAACCAACCAGCAATCTACTCCCAATGAACCACCACCTCCACCCTCATCGTCACCTCCCCCATTGCCACCACCACCACCTCCAATATCACAGTACCCTGTGCCGCAGTTCATGCAGACTGCTGGATCCATTAGTAGTATGGCATACAGCTATGGCATGACACAACAGCCGTCAATTGCAGCCTATCCCGGTGTTGGTGCTTCCACTTTTACCCCTCCTCCAATGGGTACATATCAGGGTTTTCAGGGTTCAGATGGAAATTACTATAACCAGCCCTCATCAATGCCTATGGCCCCAATATCTCGACAATAA 1542 0.4436 MGSTFNPQILVEKLAKLNGSQTSIETLSHWCIFHMNKAKQVVETWDRQFHGSPREKRLAFLYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIQNGDDFARNAALRLIVIWEERKVFGSRGQILKEEFVGRNVENTTRDVKPTNMKLRPSSGNALEKIVSAFHVVYGGQKDEDAILSKCSNAINCLDKADKEIVSGQFGGSALVDELQGHNAVLKDCIEQLTAIESSRTSLVSQLREALEDQEFKLGQVRSQIQAANVRSDRASNNCQQLLNGNNIQSIAEQSSKEIQTSMSSASFSISREREQSAPLMYTPQVSFSQKSGQVEEDPRKSAAAAVAAKLTASTSSAQMLSYVLSSLASEGVIGNQSSADYHSEKRTKLENDQPSFMPSQNPQQPLPPFSLPESIQHNAPTTNQQSTPNEPPPPPSSSPPPLPPPPPPISQYPVPQFMQTAGSISSMAYSYGMTQQPSIAAYPGVGASTFTPPPMGTYQGFQGSDGNYYNQPSSMPMAPISRQ* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0934 513 SUPERFAMILY ENTH/VHS domain 12 117 IPR008942 -
Pvu1g0934 513 MobiDBLite consensus disorder prediction 400 415 - -
Pvu1g0934 513 Gene3D - 2 129 IPR008942 -
Pvu1g0934 513 MobiDBLite consensus disorder prediction 482 513 - -
Pvu1g0934 513 MobiDBLite consensus disorder prediction 416 443 - -
Pvu1g0934 513 CDD CID_RPRD_like 7 128 - -
Pvu1g0934 513 PANTHER OS01G0925000 PROTEIN 1 513 - -
Pvu1g0934 513 SMART 558neu5 9 130 IPR006569 -
Pvu1g0934 513 Pfam CID domain 9 120 IPR006569 -
Pvu1g0934 513 MobiDBLite consensus disorder prediction 472 513 - -
Pvu1g0934 513 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 1 513 - -
Pvu1g0934 513 MobiDBLite consensus disorder prediction 367 447 - -
Pvu1g0934 513 ProSiteProfiles CID domain profile. 2 134 IPR006569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0934 Pvu-Chr1 16829512 16843867 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0934 K15559 - gmx:100806108 873.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0934 1 16829512 16843867 Pvu1g0934 1 16829512 16843867 ECH