Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0926 ATGCTACATTCCACATGTAGGAGTAGTATTCATAAAATTTGTTTATTGGAGGGCCTGTTAGTAAAGTTGATGATGAGAGGTGGAGCAGCAACATTTGATTTGGCAATAGGGCTAAGCAAGGCTGTGATCTCAGCCTCAAAAAAGAGGGGAAGGCAATGTTTGTGGGGTTCTCAAGTGGAGGAGACACTCCACAGGTTGGGTTGGCGCCAATGCCTGACCCCATCATTGGTGGCCAATGTGATTGACCCTTTCCTCCTCACTCACTATTCTCTTGCTCTTGGCTTCTTCAATTGGGCCTCTCAGCAGCCTGGCTTTGTCCACACACCCTTCACCTACCACTCACTCCTCAAATCCCTCTCACACACCAACCACTTCACTGCCATTCATTCACTTCTCAAACAAGCCAAAGCCCTCAACTTTTCCATCCACCCTTCTCTTTTCAGCTCCATCATAGCATCCCATGTTTCCCACAACCGTGCTCGTGAAGCCTTTTCGCTCTTGGGCAGTGTTGCTCCCCTTTGTGCCGAAATTGGAGGGCCCACTTGTAACTCACTCTTGGCGGCCCTTGCCTCTGATGGGTGCTTGGAAGATGCCTGCAAGCTGTTTGATGAAATGACTGAGAGGGGTATTGGTTTCAGCACGCTGGGATTTGGGGTGTTTATTTGGCGGGTTTGTGGAGAGGGTGATTTGGAGAGGGTTGTGAGCTTGTTGGACGAGGTTAAGGAACATGGTTCTGGGATTAATGGTTCTGTTGTGGCGCTATTGATTGTTCATGGGTTGTGTCGGGCTTCTAAGGTATCAGAGGCTTTGTGGATGTTGGATGAACTCAGGAGTAGGGGTTGGAAACCCGATTTCATGGCTTACTGGGTTGTTGCAGCAGTGTTCCGGATAATGGGAAATGTGGCTGATGAGGTGAAGGTTTTGAAGAAGAAGAGGAAGTTAGGGGTGGCTCCTAGAAGAAGTGATTATAGGGACTTGATACTTGGCTTGGTTAGGGAGAGGCGTATCTATGAAGCAAAAGACGTTGGGGAGGTCATAGTTGGTGGTAATTTTCCTGTTGATGATGATGTTCTCAATGCATTGATAGGATCTGTATCAAGTGTTGATCCTAGTGCAGCGACTGTGTTTTTCAATTTCATGGTTGAGAAAAAGAGGTTCCCAACTATTTTGGCCGTCAGCGAATTGAGTAGCAATCTGTGTAGGCATGGCAAAGTTGATAAATTATTGGAGGTGTTCCATGTTTTGAATTCTCAAAACTACTTTAAAGATGTGGAGGGTTTCAATGTAATGATGTCATTTTTGTGCAAAGCTGGGAAAGTGAGAGAAGGCTACACTGTTCTGCAGGAGATGAAGAAGAAAGGGTTCCAGCCCAATGTCTCATCTTATAATTACATTATGGAAGCATGTTGTAAGGAGGACCTACTGCTCCCTGCAAGGAAGCTCTGGGATGAGATGTTTTCGAATGGCTGTTGCGGGAACTTGAAAACATACAACATTCTTATACAAAAATTCTCTGAAGTGGGACAAGCTGAAGAGGCTCAAACGCTCTTCTACCACATGTTAGACAAAGGGGTGGAACCTGATGTTACAAGTTATACTTTTCTTCTTGAAGGACTCTGCCAAGAAGACAAGCTAGAAGCAGCTTTTGAGCTCTATAACAGGTCTGTCAAACAGGACATAGTCCATGCAAGAGACATATTGAGCTCGTTTACATTATCACTATGCAAGAAAGGACATCTTATGGCTGCATCCAAATTACTTTGCAGTCTTAATCATGATATAGGATGTGCAGAATCCCATATAATTTTGTTGAAAAGTTTGTCAGATGCACAAGAGATTCCAATTGCCATTGAGCACTTGAATTCTCGGTTCCTAACCAATTGGTCAGATTTGCCGGATCTTCCAGGGACAGTTAGTGTTAGAGATGGAGGAAGCATAAATTTGGGCCATGGGGAGGTTGCCAGCAGTTCTGGGGCTAGATCCAATTGGTTGGATTACTAG 2001 0.4503 MLHSTCRSSIHKICLLEGLLVKLMMRGGAATFDLAIGLSKAVISASKKRGRQCLWGSQVEETLHRLGWRQCLTPSLVANVIDPFLLTHYSLALGFFNWASQQPGFVHTPFTYHSLLKSLSHTNHFTAIHSLLKQAKALNFSIHPSLFSSIIASHVSHNRAREAFSLLGSVAPLCAEIGGPTCNSLLAALASDGCLEDACKLFDEMTERGIGFSTLGFGVFIWRVCGEGDLERVVSLLDEVKEHGSGINGSVVALLIVHGLCRASKVSEALWMLDELRSRGWKPDFMAYWVVAAVFRIMGNVADEVKVLKKKRKLGVAPRRSDYRDLILGLVRERRIYEAKDVGEVIVGGNFPVDDDVLNALIGSVSSVDPSAATVFFNFMVEKKRFPTILAVSELSSNLCRHGKVDKLLEVFHVLNSQNYFKDVEGFNVMMSFLCKAGKVREGYTVLQEMKKKGFQPNVSSYNYIMEACCKEDLLLPARKLWDEMFSNGCCGNLKTYNILIQKFSEVGQAEEAQTLFYHMLDKGVEPDVTSYTFLLEGLCQEDKLEAAFELYNRSVKQDIVHARDILSSFTLSLCKKGHLMAASKLLCSLNHDIGCAESHIILLKSLSDAQEIPIAIEHLNSRFLTNWSDLPDLPGTVSVRDGGSINLGHGEVASSSGARSNWLDY* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0926 666 Pfam PPR repeat family 422 471 IPR002885 -
Pvu1g0926 666 Pfam PPR repeat family 494 541 IPR002885 -
Pvu1g0926 666 Gene3D Tetratricopeptide repeat domain 475 613 IPR011990 GO:0005515
Pvu1g0926 666 Gene3D Tetratricopeptide repeat domain 322 474 IPR011990 GO:0005515
Pvu1g0926 666 PANTHER RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED 31 623 - -
Pvu1g0926 666 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 31 623 - -
Pvu1g0926 666 Pfam PPR repeat 256 280 IPR002885 -
Pvu1g0926 666 Pfam PPR repeat 181 210 IPR002885 -
Pvu1g0926 666 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 458 492 IPR002885 -
Pvu1g0926 666 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 178 212 IPR002885 -
Pvu1g0926 666 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 423 457 IPR002885 -
Pvu1g0926 666 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 493 527 IPR002885 -
Pvu1g0926 666 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 249 283 IPR002885 -
Pvu1g0926 666 Gene3D Tetratricopeptide repeat domain 179 258 IPR011990 GO:0005515
Pvu1g0926 666 TIGRFAM PPR: pentatricopeptide repeat domain 427 459 IPR002885 -
Pvu1g0926 666 TIGRFAM PPR: pentatricopeptide repeat domain 461 493 IPR002885 -
Pvu1g0926 666 TIGRFAM PPR: pentatricopeptide repeat domain 496 529 IPR002885 -
Pvu1g0926 666 TIGRFAM PPR: pentatricopeptide repeat domain 531 561 IPR002885 -
Pvu1g0926 666 TIGRFAM PPR: pentatricopeptide repeat domain 181 210 IPR002885 -
Pvu1g0926 666 TIGRFAM PPR: pentatricopeptide repeat domain 256 284 IPR002885 -
Pvu1g0926 666 Gene3D Tetratricopeptide repeat domain 84 171 IPR011990 GO:0005515
Pvu1g0926 666 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 528 562 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0926 405 591 Glycosyltransferase AT1G05670 24.000 7.26e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0926 - - gmx:100813184 998.038