Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0924 ATGGATGATGAATATGCTAAGCTTATAAGAAGGATGAACCCACCGAGGGTTGTGATTGACAACAATGCCTGTGAAAACGCCACTGTTATTCAGGTTGACAGTGTCAATAAACATGGGATTCTCTTGGATGTTGTCCAAGTTATTTCAGATATGAACCTTGTAATAACAAAGGCCTACATCTCCTCTGATGGGGTGTGGTTCATGGATGTGTTTAACGTGATTGATCGTAATGGAAACAAGATCAGAGATAAGGAAGTCATTGATTATATTCAAAGGAGAATTGAAAACAATCCGAGCTTTGCACCCTCACTAAGAGAGTCTGTTGGAGTTGTACCTACTGAAGAGCATACTGTAATTGAACTCACCGGCACAGACCGACCTGGGTTACTATCTGAAATCTGTGCTGTTCTGACGGACCTTCACTGTAATGTGGTGACTGCTGAGATATGGACACACAATACTAGAGCTGCAGCTGTAGTTCATGTGACAGATGATTCCAGTGGCTGTGCAATCAAGGATCCGTCTCGCCTCTCTACAATAAGGGATTTGCTTTCTAATGTTCTTAGGGGAAGTAATGATCCAAAGACAGCAAAGACAACACTTTCACCCCCTGGAGTTACAAATAGGGACAGAAGATTGCATCAGATTATGTTTGCTGATAGGGACTATGAGAGGATTGAAAGAGAAGGAAGAGGGGCACTCCGAGATAGAGGCAAACGTCCTCTCCCTCATGTAACCGTTGTAGATTGTGTTGACAAGGATTACACTGTGGTTACCATGAGAGCAACAGATCGACCAAAGTTGTTGTTTGATATTGTTTGCACTTTAACTGACATGCAGTATGTAGTTTTTCATGGTGTTGTCAAGACAGTACGGACAGAAGCTTTTCAGGAGTTTTATATTCGGCATGTGGATGGCTTTCCCATTAGTTTAGAGGCCGAACGCGAACGACTTGTGCAGTGTCTTGAAGCAGCAATTGAAAGGCGAGCATCTGAGGGAATGGAGCTGGAGTTGTGCACAAAAGATCGTGTAGGACTCCTCTCAGATATCACAAGAATATTTCGAGAGAACAGTTTGTGTATCAAAAGAGCAGAAATATCAACAGAAGAAGGAATGGCGAGAGATACTTTTTATGTTACAGATGTTACTGGTAACCCAGTTGACCCCAAGATTATAGATTCAATTCGCAGACAGATTGGTGACAAAGTACTGAACGTAAAACATAATTCTAGTCTTTCACCAAAGGCCTCTCAACCCACAACAATTGGATTTCTCTTAGGAAATTTTTTCAAAGCTCGATCTTTTCAGAATTTTAAGTTGATCAGATCTTATTCTTGA 1338 0.4148 MDDEYAKLIRRMNPPRVVIDNNACENATVIQVDSVNKHGILLDVVQVISDMNLVITKAYISSDGVWFMDVFNVIDRNGNKIRDKEVIDYIQRRIENNPSFAPSLRESVGVVPTEEHTVIELTGTDRPGLLSEICAVLTDLHCNVVTAEIWTHNTRAAAVVHVTDDSSGCAIKDPSRLSTIRDLLSNVLRGSNDPKTAKTTLSPPGVTNRDRRLHQIMFADRDYERIEREGRGALRDRGKRPLPHVTVVDCVDKDYTVVTMRATDRPKLLFDIVCTLTDMQYVVFHGVVKTVRTEAFQEFYIRHVDGFPISLEAERERLVQCLEAAIERRASEGMELELCTKDRVGLLSDITRIFRENSLCIKRAEISTEEGMARDTFYVTDVTGNPVDPKIIDSIRRQIGDKVLNVKHNSSLSPKASQPTTIGFLLGNFFKARSFQNFKLIRSYS* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0924 445 CDD ACT_ACR_4 333 404 - -
Pvu1g0924 445 Pfam ACT domain 117 166 IPR002912 -
Pvu1g0924 445 SUPERFAMILY ACT-like 24 93 IPR045865 -
Pvu1g0924 445 SUPERFAMILY ACT-like 112 188 IPR045865 -
Pvu1g0924 445 SUPERFAMILY ACT-like 331 401 IPR045865 -
Pvu1g0924 445 ProSiteProfiles ACT domain profile. 29 108 IPR002912 -
Pvu1g0924 445 ProSiteProfiles ACT domain profile. 335 414 IPR002912 -
Pvu1g0924 445 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR6 1 437 - -
Pvu1g0924 445 CDD ACT_ACR_2 117 190 - -
Pvu1g0924 445 ProSiteProfiles ACT domain profile. 118 204 IPR002912 -
Pvu1g0924 445 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 437 IPR040217 -
Pvu1g0924 445 Gene3D - 112 189 - -
Pvu1g0924 445 CDD ACT_ACR_3 255 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0924 Pvu-Chr1 16326311 16330437 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0924 - - gmx:100818506 856.67