Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0913 AGACCAGAACTCTCCCGAGGGATTCCTTTCTCCTTCTCTAACTTTCCCTTCGACATCAAAGAACTAGATTTGTGGAGGATTTTTCGCAGATGGGGAAGGGTAAGCGATATTTTCATATCAAGAAGATTGAACATTAAGAAGAAAAGGTTCGGATTTGTGAGATTTCAAGGAGTACAGAACTTCAGGGAACTAGAGAACCATTTGAACACAATATGGATTGGAAGCTGGAAACTGAAGGCTAACAGACCGAAATACAATAGATCAACAGAAACCAGAAAAGAGTGGAACATGAAGTTGAAAGGGAAGGTAATAGAGCCAGGGAGAGAGTCTAAAAAAGAGTGGAGGGTCAAAGAGGAAAAAACGTATGCAAATATAGTTAAGAGTGGTAAAGGTATTGGTGAACAACCACATAACAGGGCAAGAGTGCAGGCAATACATTTTAGAGAAGAAGAATCTTCCAGGGAGTGGCTAAAAAAGTGCTACATTGGGAGAGTCTCGGATCTAAGTAAGGTATCATGTTTGAATGAATGTCTTATTTTGGAAGGTCTCAGCCATATAAAGGTTAAATTTCTGGGTGGGTTGCATGTGTTATTGCTAGGGGAAAACGAATCAAATATCCTAGAAGCGATAGAGGAGAATAAAACATGGTTTGAAGAAATGTTTGACACCATCATCCCATGGGAAGAACAATTTGTAGCGGTGGACAAACTGGTTTGGGTGAGATGTAGGGGTTTACCATTGAAGTTATGGAATACAGATTCCTTCAAACACATTGCAGCTTTAATGGGAACACTCATTGAGGTTGATAAAGCAACGATGGCCCTGGAAGAACTCGAGTACGCAAGATTCAAAATTAGAGTGTCAGTGGGATGCGAGGCAAAATTAACCAACTACATGAGGATTAACGAGAATTTGTATCAGATATCGGTGGAGGAAGAATGCACAATCCCATAA 954 0.4025 RPELSRGIPFSFSNFPFDIKELDLWRIFRRWGRVSDIFISRRLNIKKKRFGFVRFQGVQNFRELENHLNTIWIGSWKLKANRPKYNRSTETRKEWNMKLKGKVIEPGRESKKEWRVKEEKTYANIVKSGKGIGEQPHNRARVQAIHFREEESSREWLKKCYIGRVSDLSKVSCLNECLILEGLSHIKVKFLGGLHVLLLGENESNILEAIEENKTWFEEMFDTIIPWEEQFVAVDKLVWVRCRGLPLKLWNTDSFKHIAALMGTLIEVDKATMALEELEYARFKIRVSVGCEAKLTNYMRINENLYQISVEEECTIP* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0913 317 Gene3D - 12 100 IPR012677 -
Pvu1g0913 317 Pfam Domain of unknown function (DUF4283) 152 285 IPR025558 -
Pvu1g0913 317 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 12 295 - -
Pvu1g0913 317 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 13 75 IPR000504 GO:0003723
Pvu1g0913 317 PANTHER RNA RECOGNITION MOTIF 12 295 - -
Pvu1g0913 317 SUPERFAMILY RNA-binding domain, RBD 13 153 IPR035979 GO:0003676
Pvu1g0913 317 CDD RRM_SF 12 81 - -
Pvu1g0913 317 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 85 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0913 Pvu-Chr1 15958144 15959097 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0913 - - pvu:PHAVU_008G101400g 508.449