Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0905 ATGGGGTGCACTAACTCTGTGTATAGGAAAAAAAAAACAAGCTTTCCTGAAGTTGTGTTCTTTGTTCCATCAACAAGAATTCCGGTGCAATCTGATCTTCAAAGGGTGCTTAAGGGTGTAATTCCACGGGATCTTGCTGATAAATTGACTTCTCTAAGGAATCAGATAGTGTTGGTAGCAGAGGATACTGATGGATTAGCTATAACTGAATTGCGGCGAGCTTTGAATGAATACTTGTCTCTTCTGATTGGACTTACGAAGAAAGAGTATGGTCTTGAAGGGCTAATAGATTTTAAATGGAAAAATTTAGAAGATGGGAAACAAGATAGCAGTGTAGCAAATACCTGGTTTGAGGTGCTATCTGCAGTTCACCTTATGGCTATGCTGACACTCTCTGAGGCTGACTCAATGATGATTCCAAAGGACTCGTCAGGCTCTGGATTCAGGGTTGTATCTTCAGATATCAAGAGGGAGGCAATTGATTTGTTGCTCAAGGCCTCAGGATACCTGGAGTTCTGTTTAAGGGATATTCTTACACGCATACCTCCTGAAATCAGGAATACTTTTCCCCACGACTTACAGGAGGGTGTGTTGGAGGCTATTGCTATTCAAACACTAGGCCAGGGAACTGAGATTCAATTTGGTCTTGCTGTGGAGTGTCAGAAGGCAACTTTGTCTGTGAAGAGGAGATTGGCATGTGAACAGCTGATATACTTTAGTCAGGCTTATCACTGCTTGTTAGGATGCGACACCAACCAAGGGCATGGAAGGAAGCATCTCCGATTCATCAAATGGAAATTCCTGGAAGCCAAGGCTGCAGCCTACTACTACCATGGTCTGATCCTTGACAAGGGTAATGAACCAAATAGTCCCATTGGTGCTGTGTCTTGTTTTCTTGCTGCAGAAGAGCTTCTGAGTGAAAGCAAGAAGGCCAGCTTAAGCTTTTGCCTTGCAGCTCCAGTTACAAGAGTTCCTCCACTCTGGGGTGCTATGAAATTTTTACACCAGAAAATTCCTGAAGTTGCATCAAGGAAGTCCCAGATGTATGGCTACCTTTGGGAGCAAGAGAAGGGTCTCCGATCATTGCCAGAATGGCCACTGTTACATCCATTGAAGGAGCACCTTATAGATAGTGATGAGAATCCAACTGATTGA 1155 0.4364 MGCTNSVYRKKKTSFPEVVFFVPSTRIPVQSDLQRVLKGVIPRDLADKLTSLRNQIVLVAEDTDGLAITELRRALNEYLSLLIGLTKKEYGLEGLIDFKWKNLEDGKQDSSVANTWFEVLSAVHLMAMLTLSEADSMMIPKDSSGSGFRVVSSDIKREAIDLLLKASGYLEFCLRDILTRIPPEIRNTFPHDLQEGVLEAIAIQTLGQGTEIQFGLAVECQKATLSVKRRLACEQLIYFSQAYHCLLGCDTNQGHGRKHLRFIKWKFLEAKAAAYYYHGLILDKGNEPNSPIGAVSCFLAAEELLSESKKASLSFCLAAPVTRVPPLWGAMKFLHQKIPEVASRKSQMYGYLWEQEKGLRSLPEWPLLHPLKEHLIDSDENPTD* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0905 384 Gene3D alix/aip1 like domains 31 348 IPR038499 -
Pvu1g0905 384 PANTHER ENDOSOMAL TARGETING BRO1-LIKE DOMAIN-CONTAINING PROTEIN 1 367 - -
Pvu1g0905 384 CDD BRO1_Alix_like 11 357 - -
Pvu1g0905 384 ProSiteProfiles BRO1 domain profile. 1 384 IPR004328 -
Pvu1g0905 384 PANTHER UNCHARACTERIZED 1 367 IPR038898 -
Pvu1g0905 384 SMART BRO1_2 19 375 IPR004328 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0905 Pvu-Chr1 15666086 15669362 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0905 - - gmx:100803541 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0905 1 15666086 15669362 Pvu1g0905 1 15666086 15669362 ECH