Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0900 ATGATGAATTATTTCCCCGACGAGGTAATAGAGCACATATTTGATTATGTGGTGTCACACCGTGACCGGAATGCTTTGTCTTTGGTGTGTAAAAGTTGGTACAGGATAGAGAGGTGTACGAGACAGAGGGTGTTCATAGGGAACTGTTACTCTATCACTCCGGAGAGGTTGATCCAAAGGTTTCCTGGTCTCAAGTCTTTGACTTTGAAGGGAAAACCTCATTTTGCTGACTTCAGTTTGGTTCCTTACGGTTGGGGTGGCTTTGTGTATCCATGGATTGAGGCTCTGGCCAAGAGAAGAGTTGGGTTGGAGGAGCTTAGGCTCAAGAGGATGGTGGTCTCGGATGAGAGCCTGGAGCTACTTTCTCGTTCTTTCACAAACTTCAAGTCTTTGGTTCTGGTTAGCTGTGAAGGGTTCACCACCGATGGCCTTGCTGCTGTAGCTGCAAATTGCAGGTATCTTAGGGAGCTGGATCTGCAAGAAAATGAAGTTGAAGATCACAAAGGGCAGTGGCTAAGTTGCTTTCCTGATAGCTGTACATCGCTTGTCTCTCTTAATTTTGCTTGCCTTAAAGGAGAGGTTAGTTTGGGAGCTCTAGAGAGACTTGTGGCCAGGTCTCCTAACCTGAAGAGTTTGAAGCTGAATCGTTCAGTTCCCCTTGATGCCCTGCAAAGGATACTGACACGAGCACCTCAACTAGCGGATTTGGGAATTGGATCACTTGTTCATGATCCTGAATCAGAGGCATACATAAAGCTTAAGAACACCATTCTCAAGTGCAAGTCCATAACCAGTTTGTCAGGGCTTTTGGAAGTTGCTCCTCACTGTCTTGCAGCTATATATCCTATTTGCCCAAATTTGACATCCTTAAACTTGAGCTATGCAGCAGGCATTCAGGGCAGTGATCTGATAAAACTGATTCGCCACTGTGTGAAACTTCAGCGCTTATGGATAATGGATTGCATTGGAGACAAAGGACTTGGTGTTGTAGCCCAGACATGTACAGATTTGCAGGAATTGAGGGTGTTTCCATCTGTTCCCTTTGGAAATCCAGCAGCCAATGTAACAGAAGTAGGACTTGTTGCAATATCAATGGGTTGCCCAAAGCTTCACTCATTACTCTACTTCTGCCACCAGATGACAAATGCTGCACTCATTACAGTGGCAAAGAACTGCCCCAATTTTATCCGGTTCAGGTTGTGCATCCTTGATGCAACAAAACCTGACCCTGATACAATGCAGCCACTGGACGAAGGTTTCGGTGCAATTGTGCAGTCATGCAGGCGACTGAGGCGCCTATCACTCTCAGGGCAGTTGACTGACCAGGTTTTCCTATACATTGGAATGTATGCTGAGAAGCTTGAAATGCTGTCTATTGCATTTGCTGGGGACAGTGACAAGGGAATGCTGTATGTGTTGAATGGATGCAAGAAACTGAGGAAGCTTGAGATAAGAGATTGCCCTTTCGGTGACATGGCACTTCTGACGGACGTAGGGAAGTATGAAACAATGCGATCCCTTTGGATGTCGTCCTGCGAAGTGACTGTGGGAGCCTGCAAGTTGCTGGCCAAGAAGATGCCAAGGTTGAATGTGGAGATCTTCAATGAAAATGAGCAAGAAGATTGTAGCCTGGAAGATGGGCAGAGGGTAGAGAAGATGTATTTGTATCGTACATTGGCTGGGAAAAGGAAAGATGCACCAGAATATGTATGGACTCTCTAG 1722 0.4593 MMNYFPDEVIEHIFDYVVSHRDRNALSLVCKSWYRIERCTRQRVFIGNCYSITPERLIQRFPGLKSLTLKGKPHFADFSLVPYGWGGFVYPWIEALAKRRVGLEELRLKRMVVSDESLELLSRSFTNFKSLVLVSCEGFTTDGLAAVAANCRYLRELDLQENEVEDHKGQWLSCFPDSCTSLVSLNFACLKGEVSLGALERLVARSPNLKSLKLNRSVPLDALQRILTRAPQLADLGIGSLVHDPESEAYIKLKNTILKCKSITSLSGLLEVAPHCLAAIYPICPNLTSLNLSYAAGIQGSDLIKLIRHCVKLQRLWIMDCIGDKGLGVVAQTCTDLQELRVFPSVPFGNPAANVTEVGLVAISMGCPKLHSLLYFCHQMTNAALITVAKNCPNFIRFRLCILDATKPDPDTMQPLDEGFGAIVQSCRRLRRLSLSGQLTDQVFLYIGMYAEKLEMLSIAFAGDSDKGMLYVLNGCKKLRKLEIRDCPFGDMALLTDVGKYETMRSLWMSSCEVTVGACKLLAKKMPRLNVEIFNENEQEDCSLEDGQRVEKMYLYRTLAGKRKDAPEYVWTL* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0900 573 Gene3D Ribonuclease Inhibitor 42 573 IPR032675 -
Pvu1g0900 573 Gene3D - 1 41 - -
Pvu1g0900 573 SMART LRR_CC_2 125 150 IPR006553 -
Pvu1g0900 573 SMART LRR_CC_2 367 391 IPR006553 -
Pvu1g0900 573 SMART LRR_CC_2 100 124 IPR006553 -
Pvu1g0900 573 SMART LRR_CC_2 284 309 IPR006553 -
Pvu1g0900 573 SMART LRR_CC_2 476 501 IPR006553 -
Pvu1g0900 573 SMART LRR_CC_2 427 450 IPR006553 -
Pvu1g0900 573 PANTHER PROTEIN AUXIN SIGNALING F-BOX 3 3 570 - -
Pvu1g0900 573 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 3 570 - -
Pvu1g0900 573 Pfam Transport inhibitor response 1 protein domain 62 108 IPR041101 -
Pvu1g0900 573 SUPERFAMILY RNI-like 17 533 - -
Pvu1g0900 573 Pfam F-box 3 42 IPR041567 -
Pvu1g0900 573 SMART fbox_2 5 44 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0900 Pvu-Chr1 15582541 15585741 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0900 - - gmx:100812516 1105.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0900 1 15582541 15585741 Pvu1g0900 1 15582541 15585741 ECH