Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0894 ATGATGACACATTTGTTCATGGAGAATAAAGATCCCGGATCATGGAGTTCTGCTCCTATCTACCAGTCTCAATGGCTTCAAACAACCATATCAGATTTGGATGAGAAATTGGATGCTATGAAGACCATTTTAGATGGTGACGATTCTCCAAAAGAACTCATACATTGCAAATGGAGAGAAGACCTCATAGAGATGCTTGAAGATTTTGGCCAATCTTACCGTGTATTAGCCATAGCATATAACCAACTGAAGCTCAAAAGCTCTCAGGGTACCTTTCAATCTGGATCTTTATCATCTTCTGGTACATCAAAAACCATTTGTTATATCTGCAATAAAAGAACAACAGGTAAACTGAAAGATAAAAATCTCAAGGAGGGCTGGAATCACCAACCAAAATATTCATTGGAGCATTCCAATATCAAATTTGATCGTAGTAACCTTGGTTTTGATCTTTCAAAAAAGCAAGGAGATGAATGTTCCTTGGAGCACTCCAATATCAAATTTGATCGTAGTATCCTTGGTTTTGATCTTTCAAACAAGCAAGGAGATGAATTCCATGAATTGTTATCAGCAGGCACATGCAGCAAGAAATTAAACCCAGAACGCAGAGACATTCAAATGGAGGACAGAATGACAAAATTTTCAACCACTGAAGATGCTTCTGAGAAGATTGATGATTCGGAATTAAATCAGAGAACTGAAGATCCTCTAATGACCAGTTTCAAATGTGACAAGTTGTGGTCTACACTAATGTATCAAACAAAACTTACACAGGACAATCTGCACCAGTTGGTAGAGCTGGTCCAAAGAAATGATGAAAAGAGAGAAACCATCAGAAGGCTTCGACTAAAGGTGGAAACTTTGAAGAGTGAGAATAAGGCCCTCCAGATTTCTTTAACCCACTCCAATGCTGATTCAGAATGTGATCAACCACAGATATCAAGAGGAGTAAGATCTACAAGCAAGGACTTCAAAATCGAGTATTCTACACAAGCAATCAACACTTACAAATAA 1014 0.3787 MMTHLFMENKDPGSWSSAPIYQSQWLQTTISDLDEKLDAMKTILDGDDSPKELIHCKWREDLIEMLEDFGQSYRVLAIAYNQLKLKSSQGTFQSGSLSSSGTSKTICYICNKRTTGKLKDKNLKEGWNHQPKYSLEHSNIKFDRSNLGFDLSKKQGDECSLEHSNIKFDRSILGFDLSNKQGDEFHELLSAGTCSKKLNPERRDIQMEDRMTKFSTTEDASEKIDDSELNQRTEDPLMTSFKCDKLWSTLMYQTKLTQDNLHQLVELVQRNDEKRETIRRLRLKVETLKSENKALQISLTHSNADSECDQPQISRGVRSTSKDFKIEYSTQAINTYK* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0894 337 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 1 87 IPR011684 GO:0003779
Pvu1g0894 337 PANTHER PROTEIN NETWORKED 4A 161 325 - -
Pvu1g0894 337 PANTHER PROTEIN NETWORKED 4A 8 159 - -
Pvu1g0894 337 Pfam KIP1-like protein 20 81 IPR011684 GO:0003779
Pvu1g0894 337 PANTHER KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEIN 161 325 - -
Pvu1g0894 337 PANTHER KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEIN 8 159 - -
Pvu1g0894 337 Coils Coil 264 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0894 Pvu-Chr1 15444143 15446199 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0894 - - pvu:PHAVU_001G086400g 661.759