Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0886 ATGCTCAGAACATTAACCAGGGTGTTCAAGCACACCAACCTTGCCAATGACTTGCTCCAAAAACGCAGCAGATTCTATGCAACTATGGTTGGTGGAAGAAGGCTAGAGGGGAAAGTGGCACTCATAACAGGCTCGGCAAGTGGACTTGGCAAGGCCACGGCCCATCACTTTGTCCACCATGGGGCCCAAGTCATCATTGCTGACAATGACACCATCCTTGGGCCACAAGTTGCTAAAGAGTTGGGCCCATCAGCCCGTTATGTGGAGTGTGATGTTGCTGTGGAGGCCCAAGTTGCAGAAGCTGTGAATGTTGCCATGACCCACTATGGCAAGCTGGACATCATGTACAACAATGCTGGCATCCCAGGCCCATCATTTCCCCCAAGCATAGCAGATCTAGACCTTGATGAGTTTGACAAAGTCATGAGGATCAACATAAGGGGAATGATAGCTGGTATAAAGCATGCAGCCCGGGTCATGATACCCATGGGCTCAGGCTCCATTCTATGCACATCAAGCATAAGTGGGGTAATGGGTGGGCTTGGGCCTCATCCTTATACCATATCCAAGTTTGCAATCCCTGGGGTAGTCAAATCTGTGGCTAGTGAGTTATGCAAAGCTGGGGTAAGGATCAATTGCATATCCCCAGCTCCAATTCCTACACCTATGGTTTTGGCTCAAATGCAAAACTTTTATCCTGGTTTAACCCAAGAACAGTTAGAGGGTATTGTGACTGGGTTTGTTGGGCTCGAAGGTGCTAAGTGTGAGGACATTGATGTGGCAAGGGCTGCATTGTACTTGGCATCAGATGAAGCAAAGTTTATCTCAGGTCACAATCTCATAGTTGATGGAGGCTTCACCAGCTTTAAAAGTTTCTCATTCCCTTCTTCATATCAAACTGATTAA 906 0.4757 MLRTLTRVFKHTNLANDLLQKRSRFYATMVGGRRLEGKVALITGSASGLGKATAHHFVHHGAQVIIADNDTILGPQVAKELGPSARYVECDVAVEAQVAEAVNVAMTHYGKLDIMYNNAGIPGPSFPPSIADLDLDEFDKVMRINIRGMIAGIKHAARVMIPMGSGSILCTSSISGVMGGLGPHPYTISKFAIPGVVKSVASELCKAGVRINCISPAPIPTPMVLAQMQNFYPGLTQEQLEGIVTGFVGLEGAKCEDIDVARAALYLASDEAKFISGHNLIVDGGFTSFKSFSFPSSYQTD* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0886 301 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 36 287 IPR036291 -
Pvu1g0886 301 PRINTS Glucose/ribitol dehydrogenase family signature 39 56 IPR002347 -
Pvu1g0886 301 PRINTS Glucose/ribitol dehydrogenase family signature 110 121 IPR002347 -
Pvu1g0886 301 PRINTS Glucose/ribitol dehydrogenase family signature 160 176 IPR002347 -
Pvu1g0886 301 PRINTS Glucose/ribitol dehydrogenase family signature 186 205 IPR002347 -
Pvu1g0886 301 PRINTS Glucose/ribitol dehydrogenase family signature 207 224 IPR002347 -
Pvu1g0886 301 PRINTS Glucose/ribitol dehydrogenase family signature 250 270 IPR002347 -
Pvu1g0886 301 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 17 297 - -
Pvu1g0886 301 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 110 121 IPR002347 -
Pvu1g0886 301 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 174 IPR002347 -
Pvu1g0886 301 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 186 205 IPR002347 -
Pvu1g0886 301 Pfam Enoyl-(Acyl carrier protein) reductase 44 287 - -
Pvu1g0886 301 PANTHER ALCOHOL DEHYDROGENASE-LIKE PROTEIN 17 297 - -
Pvu1g0886 301 Gene3D - 27 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0886 Pvu-Chr1 15275102 15277914 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0886 34 287 Acyl Lipid Metabolism Gene Families AT3G55290 31.179 3.55e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0886 - - gmx:100808525 493.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0886 1 15275102 15277914 Pvu1g0886 1 15275102 15277914 ECH