Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0880 GGTGGGGACAGTACAAAAAAAGGAAGTATTAAAAAAGACCCTGCATGGAATCACTGTATTTCTATTGATGGGAAATCAAGAAATGTGAAGTGTAAATATTGTGAGAAGATTTTAACTGGGGGTATCTATAGACTAAAGCATCATCTTGCATGCACTTCAAAAGATGTTGGAGCATGTCTTGTTGTCCCAGAAGAAGTTAAAAAAATTAATGTTGGGTACTGTTTCTATGCTGCAGTAAAGTTTAATCAAAATTGA 255 0.3451 GGDSTKKGSIKKDPAWNHCISIDGKSRNVKCKYCEKILTGGIYRLKHHLACTSKDVGACLVVPEEVKKINVGYCFYAAVKFNQN* 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0880 84 Pfam BED zinc finger 13 51 IPR003656 GO:0003677
Pvu1g0880 84 ProSiteProfiles Zinc finger BED-type profile. 10 66 IPR003656 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0880 Pvu-Chr1 15209690 15209946 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0880 - - pvu:PHAVU_001G0851000 182.956