Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0874 ATTCAAGGAAAACTTTACCTTAGAATTGACCAAAAAGGTGAAGGTGCCAAGTGGCGTCGCACTGTTGGCCAGGAGTTATATTCACCACTGATGTTGGCCTTCACAGAACAGGATGGGGATAATTTGTTACATTTCGCTGCATCAACATTTTCAGGCACAGATTCTTCCTACAATTTACCAAACAACATTGCTCTTTTAACCCTCCAGGAATTTAAAAATGGAAAAGTACTCGTGAGATTGGCTCACCTTTATGAGATTGGAGAGGACAATAATTACTCAGTAATGGCTAGTGTGGAATTGAAAAAGTTGTTTCCTAACAAGAAGATAAATAAAGTGACAGAGATGAGTTTGTCTGCTAATCAAGAAAGAGTTGAAATGGAAAAGAGGAAGTTAGATTGGAAGGTAGAAGGTTCCACTGATGAACCTAAGGTGGTGAGGGGAGGACCTGTTGATCCTACAAACTTGGTGGTTGAACTTGCTCCAATGGAGATCCGGACATTCTTCATTGACCTTAATCCCCTTCAAACAGTTTCTGAAGCAGAAAATCATATGGCTAATTATCAAAGCATCCAATAA 576 0.3958 IQGKLYLRIDQKGEGAKWRRTVGQELYSPLMLAFTEQDGDNLLHFAASTFSGTDSSYNLPNNIALLTLQEFKNGKVLVRLAHLYEIGEDNNYSVMASVELKKLFPNKKINKVTEMSLSANQERVEMEKRKLDWKVEGSTDEPKVVRGGPVDPTNLVVELAPMEIRTFFIDLNPLQTVSEAENHMANYQSIQ* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0874 191 PANTHER ALPHA-MANNOSIDASE 1 175 - -
Pvu1g0874 191 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 62 168 IPR041147 -
Pvu1g0874 191 PANTHER ALPHA-MANNOSIDASE 1 175 - -
Pvu1g0874 191 Gene3D - 48 173 - -
Pvu1g0874 191 SUPERFAMILY Galactose mutarotase-like 6 171 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0874 Pvu-Chr1 15118594 15120038 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0874 1 171 Glycoside Hydrolase AT5G66150 54.023 2.02e-48 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0874 K01191 - pvu:PHAVU_001G0846000 381.333