Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0873 ATGATTACTATAGTGGAACACTCAAGATGTTCCAATGAGCAGAATATACATGAGACTGTGAATAAACATTCCATTGAGATGGAGTTGGTTGATTGCGAGGTTAATTTAGGAATATATATTCAAGATAGTAGTGTGGAATTCTCAGTGTTGGTGGACCGCTCAGTTGGAGGTTCCAGCTTGGAGGATGGCCAAATGGAGCTGATGCTCCATAGGAGGTTGCTTCATGATGATGCAAGAGGTGTAGGTGAGGTACTCAATGAAACAGTTTGCATTGCTGATAAGTGTGAGGGCTTAACG 297 0.4209 MITIVEHSRCSNEQNIHETVNKHSIEMELVDCEVNLGIYIQDSSVEFSVLVDRSVGGSSLEDGQMELMLHRRLLHDDARGVGEVLNETVCIADKCEGLT 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0873 99 SUPERFAMILY Galactose mutarotase-like 34 96 IPR011013 GO:0003824|GO:0005975|GO:0030246
Pvu1g0873 99 Pfam Glycosyl hydrolases family 38 C-terminal domain 25 79 IPR011682 GO:0004559|GO:0006013
Pvu1g0873 99 PANTHER ALPHA-MANNOSIDASE 33 99 - -
Pvu1g0873 99 Gene3D - 34 97 - -
Pvu1g0873 99 PANTHER ALPHA-MANNOSIDASE 33 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0873 Pvu-Chr1 15109683 15111628 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0873 34 99 Glycoside Hydrolase AT3G26720 72.727 2.24e-30 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0873 K01191 - pvu:PHAVU_001G0846002 200.675