Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0872 ATGGTTTCCGCCACACATGTTTTTGTTCAGGATTTGGATGGGAAGAAAATTGAGTCTCAGCTTCTGCCTCTATCTAATGCTACTTTGACTATGAGAAAACATTATGTCAGAGCATATACAGGAAAAGCTCCTGGGAGCAACGTACTCAAGTATTGGCTTGCATTTCCAGTGTCTGTACCTCCCCTTGGTTTCAACACCTATACAGTCACAAGCTCTGATCAATCTAATGATAGTTCAACTCTCTCAAAGATGTCAAGTCCAGAAGGAAGTACTGATAAAAGCATAAAAGTTGGACAAGGGAATCTAATGCTACTTTATTCAGCAGATGAGGGAAAACTGACTCACTATGTTACAGCATCAGTTGAGCAATCATACAGTTATTATTCTGGAAACGATGGGACTGATAAAGATCCCCAGGCTTCAGGGGCATATGTCTTCCGTCCAAATGGTTCGTTTCCCATTAAATCCGATCATCAGGTATCTTTTTCTGTCCTGCGTGGTCCAATATTGGATGAAGTGCATCAACAACTCAGTCCATGGGTATCCCAGATTACACGGGTATTCAAGGCAAAAGAACATGCTGAAATTGAGTTCACAGTTGGGCCTATACCAGTGGATGATGGCATTGGGAAAGAAATTATTACTCAATTTAAAACGACAATGAAGAGCAACAAGACATTCTACACCGATTCTAGTGGTCGTGACTTCATTAAGAGGGTTTGTTAA 726 0.4091 MVSATHVFVQDLDGKKIESQLLPLSNATLTMRKHYVRAYTGKAPGSNVLKYWLAFPVSVPPLGFNTYTVTSSDQSNDSSTLSKMSSPEGSTDKSIKVGQGNLMLLYSADEGKLTHYVTASVEQSYSYYSGNDGTDKDPQASGAYVFRPNGSFPIKSDHQVSFSVLRGPILDEVHQQLSPWVSQITRVFKAKEHAEIEFTVGPIPVDDGIGKEIITQFKTTMKSNKTFYTDSSGRDFIKRVC* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0872 241 Gene3D - 1 96 IPR013780 -
Pvu1g0872 241 PANTHER ALPHA-MANNOSIDASE 2 240 - -
Pvu1g0872 241 PANTHER ALPHA-MANNOSIDASE 2 240 - -
Pvu1g0872 241 SUPERFAMILY Galactose mutarotase-like 2 240 IPR011013 GO:0003824|GO:0005975|GO:0030246
Pvu1g0872 241 Gene3D - 97 241 - -
Pvu1g0872 241 MobiDBLite consensus disorder prediction 71 93 - -
Pvu1g0872 241 Pfam Glycosyl hydrolases family 38 C-terminal domain 114 240 IPR011682 GO:0004559|GO:0006013
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0872 Pvu-Chr1 15095230 15097737 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0872 2 240 Glycoside Hydrolase AT3G26720 54.733 2.40e-86 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0872 K01191 - pvu:PHAVU_001G084500g 477.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0872 1 15095230 15097737 Pvu1g0872 1 15095230 15097737 ECH