Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0862 ATGCCAGATTTAGGGAACCTGTCTCTGTCTTCGACTCTCACACTCTCTCACTGCTCCTCCGATGTCGCAGACGCTCCCGTCAAAACCCTACCCGATGCCTTCGTTTCGGAGCCTGCCTTCGAGCATCGGGTTGTTAAGCGCACCCGCGGCTCACTCGATCGGGTCAAGAAGCCCGCCTCTCACAAAGCCTTCCAGGATCGCCTCAAAGATCCCTTCTCTCATCCATTTCTTGTTGGCGCTCCCAAGATGGAGGAATGTTGTTTTTGCCGCCATTTTATCTACCCTGGTGAGGAGGTAGTGTGTTCGGTTCGCGGATGTGACGCTCGCTTCCATTCTGAATGTGTAAAAGATTCTGTTGGAGCTACCAGTCTGAAAAAATACAAGTGTCCACAGCATGTATGCTTCATTTGCAAGCAAAAAAAGCACTTGAGGTGTGTACGATGTAAAATTGCGTTCCATAATAAATGTGCACCATGGCCAGATGCAGTTTTGCTGCTAAAAGATCATCCTGGTCTAGCTGTTTGCTGGAGGCATCCTTCTGATTGGCGCTTGGATAGGAAGGCTGGCTGA 570 0.5 MPDLGNLSLSSTLTLSHCSSDVADAPVKTLPDAFVSEPAFEHRVVKRTRGSLDRVKKPASHKAFQDRLKDPFSHPFLVGAPKMEECCFCRHFIYPGEEVVCSVRGCDARFHSECVKDSVGATSLKKYKCPQHVCFICKQKKHLRCVRCKIAFHNKCAPWPDAVLLLKDHPGLAVCWRHPSDWRLDRKAG* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0862 189 SUPERFAMILY FYVE/PHD zinc finger 80 140 IPR011011 -
Pvu1g0862 189 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 80 181 IPR013083 -
Pvu1g0862 189 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR3 53 187 - -
Pvu1g0862 189 SMART PHD_3 85 133 IPR001965 -
Pvu1g0862 189 PANTHER SET DOMAIN PROTEINS 53 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0862 Pvu-Chr1 14849735 14852320 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0862 - - pvu:PHAVU_001G083500g 403.29