Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0857 ATGGTGACAGTCGAGGAAATCCGCAACGCCCAGCGCTCCCATGGCCCCGCCACCATCCTCGCCTTTGGCACTGCCACCCCCTCCAACTGTATCTCCCAAGCGGATTACCCTGACTACTACTTCCGCATTACCAACAGCGAACACATGACCGACCTCAAGGAGAAGTTCAAGCGCATGTGTGAAAAGTCGATGATAAAGAAGCGTTACATGCACCTGACGGAGGAGTTTCTGAAGGAGAATCCAAACATGTGTGCGTACATGGCGCCGTCGCTGGACGCGAGGCAGGACATAGTGGTGGTGGAAGTGCCGAAGCTGGGAAAAGAAGCAGCGAGGAAGGCGATAAAGGAGTGGGGTCAACCCAAGTCAAAGATCACACACCTGGTGTTCTGCACCACTTCAGGCGTGGACATGCCTGGAGCCGATTACCAGCTTACCAAGCTTCTAGGGCTGAGGTCCTCCGTGAAGCGCCTCATGATGTACCAGCAGGGCTGCTTTGCCGGCGGCACCGTCCTCCGCCTCGCCAAGGACCTTGCCGAGAACAATAAGGGCGCCCGTGTTCTAGTAGTCTGCTCCGAAATCACTGCCGTGACGTTCCGCGGCCCGTCCGATGCCCACCTTGACTCCCTCGTCGGTCAGGCACTGTTTGGGGACGGAGCTGCCGCGATGATCATAGGAGCGGATCCTGACAGGAGTGTAGAACGGCCTATATTTGAATTGGTATCGGCCGCCCAGACCATTCTGCCGGACTCTGATGGTGCCATCGACGGGCACTTAAGGGAGGTGGGACTAACGTTCCATCTTCTAAAAGATGTGCCTGGAATCATCTCGAAGAACATTGAGAAGAGTCTGACAGAGGCGTTTGCGCCGATTGGGATTAATGACTGGAACTCGATCTTCTGGGTGGCACACCCGGGTGGACCGGCGATTCTGGACCAGGTTGAGGAGAAGTTACGGCTGAAACCGGAGAAACTCCGGTCCACCCGGCACGTGCTGAGCGAGTATGGAAACATGTCAAGTGCATGTGTTTTGTTCATTCTTGATGAAATGAGGAAGAAGTCGAAGGAGGAAGAGAAGGGCAGCACAGGAGAAGGGCTAGAATGGGGGGTGTTATTCGGGTTCGGGCCGGGTCTAACCGTTGAGACGGTTGTGCTGCACAGCGTTCCCTTGGAGGGGTGA 1176 0.5595 MVTVEEIRNAQRSHGPATILAFGTATPSNCISQADYPDYYFRITNSEHMTDLKEKFKRMCEKSMIKKRYMHLTEEFLKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAARKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDAHLDSLVGQALFGDGAAAMIIGADPDRSVERPIFELVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGIISKNIEKSLTEAFAPIGINDWNSIFWVAHPGGPAILDQVEEKLRLKPEKLRSTRHVLSEYGNMSSACVLFILDEMRKKSKEEEKGSTGEGLEWGVLFGFGPGLTVETVVLHSVPLEG* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0857 391 ProSitePatterns Chalcone and stilbene synthases active site. 156 172 IPR018088 GO:0009058|GO:0016746
Pvu1g0857 391 PIRSF PKS_III 2 388 IPR011141 GO:0009058|GO:0016747
Pvu1g0857 391 PANTHER CHALCONE SYNTHASE 2 2 389 - -
Pvu1g0857 391 Pfam Chalcone and stilbene synthases, N-terminal domain 5 228 IPR001099 -
Pvu1g0857 391 Pfam Chalcone and stilbene synthases, C-terminal domain 238 388 IPR012328 -
Pvu1g0857 391 SUPERFAMILY Thiolase-like 1 232 IPR016039 GO:0016746
Pvu1g0857 391 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 2 389 IPR011141 GO:0009058|GO:0016747
Pvu1g0857 391 CDD CHS_like 16 384 - -
Pvu1g0857 391 Gene3D - 236 390 IPR016039 GO:0016746
Pvu1g0857 391 Gene3D - 1 235 IPR016039 GO:0016746
Pvu1g0857 391 SUPERFAMILY Thiolase-like 235 387 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0857 Pvu-Chr1 14547185 14549317 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0857 138 374 Miscellaneous Gene Families AT4G34510 23.810 1.07e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0857 K00660 - gmx:100775264 734.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0857 1 14547185 14549317 Pvu1g0857 1 14547185 14549317 ECH