Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0852 ATGGCAACGGTATCGATGGCATCGTGCGTGGCGTCAAAAGGCGCGTGGAGTACAGAGACAAAAGTGAAATCTTCGGGTCAGATGAGCCTGAACCGTCATGAATTGAAATACGATGGGTTGAGATCTCTGAACAAGGTACTCGTGCGAAGCACGCATGCGAGCAAAATGGGAAGCTCTTTGGCTGCGAAGAGTAGCAAAAGTGGGCGTGAGAAGGTTTTGGAGAAGATCGAGTGCGGGATGAACTTGATCTTTGTTGGGGCTGAGGTTGCACCTTGGAGTAAAACTGGGGGCCTCGGTGATGTTCTCGGAGGACTTCCATCAGCTTTGGCCGAACATGGACACCGTGTTATGACAGTGTCACCGCGTTACGACCAATACAAGGATGCATGGGACACTAATGTTACCGTGGAGGTCAAAGTTGCTGATAGAATAGAAACTGTCCGTTTTTTTCACTGCTACAAGCAAGGTGTTGATCGTGTTTTTGTAGACCACCCATGTTTCCTTGAGAAGGTGTGGGGCAAGACCGGTTCAAAACTCTACGGCCCTAGTGCTGGAGTGGATTATGAAGATAACCAACTTAGATACAGCTTGTTATGCCAGGCTGCCCTTGAGGCACCAAGGGTTTTGAACTTAAACAGCAACAAATATTTCTCGGGACCATATGGTGAAGATGTGATCTTTGTTGCCAATGATTGGCACACTGCTCTTCTTCCGTGCTACTTGAAATCAATGTACCAGACCAGGGGGGTTTATAGAAACACAAAGGTTGCATTTTGTATTCATAACATATCCTACCAGGGTAGGCATCCCTTTGAAGACTTCCCTCTTCTCAATTTACCTAATGAATACAGGAGCGCTTTTGACTTTACTGATGGGCATCTTAAGCCTGTGAGGGGAAGGAAAATTAACTGGATGAAAGCTGCAATATTAGAATCGGACCTAGTGCTCACTGTAAGTCCATATTATGCCAAGGAACTTGTTTCCGGAGAGGATAGAGGTGTAGAATTGGACAACATAATTCGCAAAACTGGCGTTGCCGGTATCGTGAATGGCATGGATATTCGGGAGTGGAGTCCAAAAACTGATAAATTCATAGATATACACTTCGATACAACAAGTGTCAAGGAAGCAAAATTCCTGCTGAAAGAGGCCCTTCAGGCAGAGGTTGGCTTACCTGTAAACAGGGATATCCCTCTGATAGGCTTCATTGGTAGGCTTGAAGAGCAGAAAGGTTCAGATATTCTTGTGGAAGCCATCCCAAAGTTCATTGACCAGAATGTTCAGATCATAATTCTTGGAACTGGCAAAAAGAGCATGGAGAAGCAGATTGAGCAACTAGAGGAAATTTATCCGGAGAAGGCCAGAGGCATAGCAAAATTCGATGGTCCCTTGGCTCACAAGATAATTGCTGGATCTGACTTCATAATGATCCCAAGTAGATTTGAACCCTGTGGTCTAGTTCAGTTGCATTCTATGCCATATGGAACGGTGCCAATAGTTTCTTCCACTGGTGGACTCGTTGATACCGTTCAAGAAGGGTTTACTGGATTCCACATGGGTGCATTTAACGTAGACTGTGAAGCTATTGATCCTGCTGATGTGGAAAAGATAGCAACTACCGTAAGGAGAGCCCTTGGAACATATGGTACCGTAGCCATGGAAAAGATTATCCAGAACTGCATGGCCCAAGACTTTTCATGGAAG 1704 0.4536 MATVSMASCVASKGAWSTETKVKSSGQMSLNRHELKYDGLRSLNKVLVRSTHASKMGSSLAAKSSKSGREKVLEKIECGMNLIFVGAEVAPWSKTGGLGDVLGGLPSALAEHGHRVMTVSPRYDQYKDAWDTNVTVEVKVADRIETVRFFHCYKQGVDRVFVDHPCFLEKVWGKTGSKLYGPSAGVDYEDNQLRYSLLCQAALEAPRVLNLNSNKYFSGPYGEDVIFVANDWHTALLPCYLKSMYQTRGVYRNTKVAFCIHNISYQGRHPFEDFPLLNLPNEYRSAFDFTDGHLKPVRGRKINWMKAAILESDLVLTVSPYYAKELVSGEDRGVELDNIIRKTGVAGIVNGMDIREWSPKTDKFIDIHFDTTSVKEAKFLLKEALQAEVGLPVNRDIPLIGFIGRLEEQKGSDILVEAIPKFIDQNVQIIILGTGKKSMEKQIEQLEEIYPEKARGIAKFDGPLAHKIIAGSDFIMIPSRFEPCGLVQLHSMPYGTVPIVSSTGGLVDTVQEGFTGFHMGAFNVDCEAIDPADVEKIATTVRRALGTYGTVAMEKIIQNCMAQDFSWK 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0852 568 PANTHER GRANULE-BOUND STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 8 568 - -
Pvu1g0852 568 Pfam Glycosyl transferases group 1 394 523 IPR001296 GO:0016757
Pvu1g0852 568 PANTHER GRANULE-BOUND STARCH SYNTHASE 8 568 - -
Pvu1g0852 568 TIGRFAM glgA: glycogen/starch synthase, ADP-glucose type 80 568 IPR011835 GO:0004373
Pvu1g0852 568 CDD GT5_Glycogen_synthase_DULL1-like 81 568 - -
Pvu1g0852 568 Hamap Glycogen synthase [glgA]. 80 568 IPR011835 GO:0004373
Pvu1g0852 568 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 78 567 - -
Pvu1g0852 568 Pfam Starch synthase catalytic domain 82 342 IPR013534 -
Pvu1g0852 568 Gene3D Glycogen Phosphorylase B; 353 563 - -
Pvu1g0852 568 Gene3D Glycogen Phosphorylase B; 82 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0852 Pvu-Chr1 13847702 13851387 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0852 1 568 Glycosyltransferase AT1G32900 66.957 0.0 773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0852 K13679 - gmx:100787590 965.296