Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0845 GATTTGCATGATTTGGGTGCTAATGACGATGAAAGTGAAGGAACCTTTGTGAATGATAGAGGGCTGTCAGATACAGAGTGGGAATCAGAAGAGTTAGACAGCATGGACGAATTTGAAGATGGTGATGAGGATATCAGGACAGGTGATTTTTCGTGGGATTTGGGTACCTATTTTACATACAAGGAAGCATTTAAAGATGCCATTAGAACTTATGCTGTCCATTCAGGGAGGAATTTGAAATTAGTAAAAAATGATAATTCGAGAGTTCGTGTGCGTTATATTGGAGCACAAGAACAATGTGAATTACCCTCAACAAGCTGTTGGCAGTTAAGAAAACTAAATGATGTGCATACCTGTGCTAGGCAGTTTAAGGTTGATTTGTTGAGCACTAAATGGTTGAGTGGAAGGTTGGAGACTTCTTTAAGTCAGAATTCAAAATTGAGAATTAATGATGTAAGGAATAAAACTGTTAGAAAATGGAACACAAGTATAAGTAAGTCAAAAGATCAACGGGCAATGGCGATGGCGTTGAAGAATGTCCAAGGTTTATTTCAAGAGCAGTACAAACGAATTTATGACTATGCATATGAGCTTATGCGTGCAAATCCGGGGTCTACAGTGAAAGTCAAAGTTGAAGACATGAATGGATTCAAAGTTTTTAACAGATTTTATGTGTGCTTAAAAGCCTGCAAGGATAGCTTTATATCTTGTAGGTCCATAATTGCTATGGATGGGTGCTTCTTGAAAGGCTTTTATGGTGATGTTGGGGGTATACATGTACGTGAAGGCATCACTTTCATGTCTGACCAACAAAAGGTATATTCTTTGCTGTCAATTGTTGATTTTGGTTTGCTGCCTGCCATTCAAGAGATCATACCTGGGGCAGTGCAGCGGTTCTGTGTTCGACACTTGTACTCCAACTTTATAAAGAAATACCCAGGAAAAAAACTTAAAACTTTAATGTGGAGGGCAGCTACCAGCACATATCCCCTGGGAGAGGGAGATGAGGTGGTGGTAGTTGGGCAAGGGGGTGGTACCATAATGGCAATCAGTGGGAGTCAGGTGGCAGTGATTGGTGTTAGGGATTGTGATGGTAGGGGTGATGACATTGTGTGTGGTAGCTGGAGAAATGTTCGCTTTAATTATGTTAGAATTTCGTGGAATTGGACTTTAGAGTTGTGGTTCCAATTGTTTTGGTCCAGGTCAAGGTTCACATTCACTCCAAAATGTGACTCACTTGTCAACAATATTTCTGAAGGCTTTAATAGTGTGCTTGTACCTGCACGTGGAAAACCAATCATTACCATGCTAGAAGATATCAGGACTTATATAATGCAGAGATGGGCAAAGAACATGTTGAAAATTGCTTCATTTAAAGGATCAATATGTCCAAATATTTTAAGCAGGTTACAAAAAGAAGCAAATCAAACTCGATATTGGATACCCAGCTCTTCTGCAGATCACCTATTTGAAGTGAGACATACCTCTACCATTGGAGAAAAGTATGCAGTTAACTTGGAGCTACATCAGTGCAGCTGCCGAAAATGGATGTTGACTGGAATACAATGTTGCCATGCACTTGCTGCCATGAAATTTCTGAATGTAGATCCAGTGAACTTCATTTCATTTTGGTACAAGAAGGAAACATATGCAGAGGTGTACAACACAGTTATCTGTCCAGTTAATGGTGAACAAGTATGGGAAAGAACTGAAATTTCAGATGTTGTGCCACCTCCCACAAAGAAGATGCCTGGAAGACCAAAAAAGAAGAGAAGGTTAGAGCCATGGGAGCTTGGCCACAATAGAAAGTCTTGCATTGAAAAGCCATCTGAACAAGGTCCAAGTGCAAAACGACCATCTCACCCAAGGCCATCTCAGCAAGCTCCAAGTCAAGCAGCTACAAGTGCACTAGGGTCACCTCAGGAAGCTCCAGGTCAGGCAGCTACAAGTGCACCAGGGCCATCTCAGGCAGCTCAAAGGACAACAAGATCAACTGCAACATTTTCAAGACCCAACACGAGGCTTAAGTTACAGTCCATCAGAGGCCGCTTTTGGAAGCCATGA 2064 0.4133 DLHDLGANDDESEGTFVNDRGLSDTEWESEELDSMDEFEDGDEDIRTGDFSWDLGTYFTYKEAFKDAIRTYAVHSGRNLKLVKNDNSRVRVRYIGAQEQCELPSTSCWQLRKLNDVHTCARQFKVDLLSTKWLSGRLETSLSQNSKLRINDVRNKTVRKWNTSISKSKDQRAMAMALKNVQGLFQEQYKRIYDYAYELMRANPGSTVKVKVEDMNGFKVFNRFYVCLKACKDSFISCRSIIAMDGCFLKGFYGDVGGIHVREGITFMSDQQKVYSLLSIVDFGLLPAIQEIIPGAVQRFCVRHLYSNFIKKYPGKKLKTLMWRAATSTYPLGEGDEVVVVGQGGGTIMAISGSQVAVIGVRDCDGRGDDIVCGSWRNVRFNYVRISWNWTLELWFQLFWSRSRFTFTPKCDSLVNNISEGFNSVLVPARGKPIITMLEDIRTYIMQRWAKNMLKIASFKGSICPNILSRLQKEANQTRYWIPSSSADHLFEVRHTSTIGEKYAVNLELHQCSCRKWMLTGIQCCHALAAMKFLNVDPVNFISFWYKKETYAEVYNTVICPVNGEQVWERTEISDVVPPPTKKMPGRPKKKRRLEPWELGHNRKSCIEKPSEQGPSAKRPSHPRPSQQAPSQAATSALGSPQEAPGQAATSAPGPSQAAQRTTRSTATFSRPNTRLKLQSIRGRFWKP* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0845 687 MobiDBLite consensus disorder prediction 1 24 - -
Pvu1g0845 687 Pfam SWIM zinc finger 504 530 IPR007527 GO:0008270
Pvu1g0845 687 PANTHER POLYPROTEIN, PUTATIVE-RELATED 253 326 - -
Pvu1g0845 687 PANTHER POLYPROTEIN, PUTATIVE-RELATED 45 253 - -
Pvu1g0845 687 PANTHER - 253 326 - -
Pvu1g0845 687 PANTHER - 45 253 - -
Pvu1g0845 687 MobiDBLite consensus disorder prediction 572 687 - -
Pvu1g0845 687 SMART 26again6 509 536 IPR006564 GO:0008270
Pvu1g0845 687 MobiDBLite consensus disorder prediction 619 676 - -
Pvu1g0845 687 MobiDBLite consensus disorder prediction 590 607 - -
Pvu1g0845 687 ProSiteProfiles Zinc finger SWIM-type profile. 502 534 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0845 Pvu-Chr1 13514905 13519177 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0845 - - pvu:PHAVU_001G081900g 1359.36