Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0842 ATGATCTCCCCCTCAAGTAACCTTAAGATGGAGGAAGACAAGAAACTAGAGATAGTTGAAAGAGATGAAGACTTGGAGGATCAGCTACCTGCCGCTGAAGTTCAGTCTCAGCCATGGACAGAACAGATAACACTGAGAGGAGTGTTTGTGAGCATGTTGATTGGAATCATATACAGCATAATAGTCATGAAGCTCAACCTCACAACTGGCATGGTTCCTAACCTGAATGTTTCTGCTGCACTCCTTGCCTTTGTGTTTGTCCGAACCTGGACCAAAGCTTTGCACAAGGTTGGTATTATAGCCAAACCCTTCAGCCGCCAGGAAAACACCATCATACAGACTTGTGCAGTTGCATGCTATAGCATTGCTGTTGGAGGAGGATTTGCTTCTTATCTGTTGGGATTAAACAGAACGACTTATGAGTTGTCTGGAGTAGGAAACGAGGGTAACAACCCAAACGCTATTAAAGAACCTGGATTTGGTTGGATGACTGCCTTCCTTTTTGTGGTGTGCTTTATTGGCCTCTTTGTCTTGATTCCACTCAGAAAGATCATGATAGTTGATCTAGAATTAACTTATCCCAGTGGCTTGGCAACCGCTGTTCTCATCAATGGTTTCCATACTCAGGGAGACAAAGTGGCCAAGAAACAAGTACAGGGTTTCACAAAATATTTTTCTATCAGCTTCTTATGGGGTTTATTCAAGTGGTTCTTCTCAGGAATAGAGGGCTGTGGATTCGAACAGTTCCCCACCTTTGGATTACAAGCTTGGAAGCAAACATTCTATTTCGATTTTAGTATGACTTTTGTTGGAGCAGGAATGATTTGCTCTCACCTCGTAAACGTGTCTTTGCTCCTTGGAGCTGTGCTCTCCTATGGGCTAATGTATCCACTCGTTGACAGACGTAGAGGAGACTGGTTCCCTGACAATTTAGAAGAGAGTAACATGAAGGGCTTATACGGTTATAAGGTTTTTCTATCAATCGCTCTAATCCTGGGTGATGGCATATACAACTTCACCAAGATTATAATTTGCACAGTCCTCAGCGTCCATAACAGAATAAAGAGCAAGAACAATAAAAATGTGGCTGCTGATAGAAAGGGGAATCCCAATGAGGACATTAAACAAGCTGAGACATTTCTGACGGAGAGCATTCCCATGCGGATTGGAATAATTGGATACGTGGTTTTCACAATCATTTCCATAATTATATTACCACGCATGTTTCCTCAGCTGAAATGGTACTACATTGTGGTTGCTTATATATTTGCTCCTTCTCTGGCATTCTGTAACGCTTTTGGAGCAGGTCTCACGGACATAAACATGGCATATAATTATGGGAAAGTTGCACTCTTTACCCTGGCAGCAATTACAGGAAAAGAAAATGGTGTGGTGGCTGGACTTGTGGGTTGTGGACTCGTTAAATCCGTGGTCTCGGTATCTTGTATTCTGATGCAAGATTTCAAGACTGCTCATTACACACGTACCTCACCCAGAGCCATGTTTATATGCCAAGTAATCGGCATTGCAATGGGCTGTGTGACAGCTCCTCTCAGCTTCTTCCTATACTACAAGGCATTCGATGTGGGAAATCCGCAAGGAGAATTCAAAGCTCCTTATGCTTTAATTTACAGAAACATGGCAATCATAGGTGTCCAAGGTTTCTCAGCATTGCCCCAGCATTGCTTGCAGCTTTGCTTTGGGTTCTTCGCTTTTGCCATCGGAGCAAACACGATCAGAGACCTTTCACCACAAAAGATTGGTAAATGGGTGCCATTACCGATGGTGATGGCCGTACCATTTCTGGTTGGAGCATACTTTGCAATCGACATGTTCATAGGTAGTGTGGTTGTGTTTGTGTGGCACAAGCTGGACTCCATTAAGGCAGAGTCGATGGTTCCAGCAGCTGCTTCTGGACTCATTTGTGGAGAAGGACTATGGACTTTACCTGCTGCGATTCTAGCTCTAGCAAGAATCCATCCTCCTATCTGCATGAAATTCGTTCCCTCCTAA 2013 0.4362 MISPSSNLKMEEDKKLEIVERDEDLEDQLPAAEVQSQPWTEQITLRGVFVSMLIGIIYSIIVMKLNLTTGMVPNLNVSAALLAFVFVRTWTKALHKVGIIAKPFSRQENTIIQTCAVACYSIAVGGGFASYLLGLNRTTYELSGVGNEGNNPNAIKEPGFGWMTAFLFVVCFIGLFVLIPLRKIMIVDLELTYPSGLATAVLINGFHTQGDKVAKKQVQGFTKYFSISFLWGLFKWFFSGIEGCGFEQFPTFGLQAWKQTFYFDFSMTFVGAGMICSHLVNVSLLLGAVLSYGLMYPLVDRRRGDWFPDNLEESNMKGLYGYKVFLSIALILGDGIYNFTKIIICTVLSVHNRIKSKNNKNVAADRKGNPNEDIKQAETFLTESIPMRIGIIGYVVFTIISIIILPRMFPQLKWYYIVVAYIFAPSLAFCNAFGAGLTDINMAYNYGKVALFTLAAITGKENGVVAGLVGCGLVKSVVSVSCILMQDFKTAHYTRTSPRAMFICQVIGIAMGCVTAPLSFFLYYKAFDVGNPQGEFKAPYALIYRNMAIIGVQGFSALPQHCLQLCFGFFAFAIGANTIRDLSPQKIGKWVPLPMVMAVPFLVGAYFAIDMFIGSVVVFVWHKLDSIKAESMVPAAASGLICGEGLWTLPAAILALARIHPPICMKFVPS* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0842 670 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 35 655 IPR004813 GO:0035673
Pvu1g0842 670 Pfam OPT oligopeptide transporter protein 42 654 IPR004813 GO:0035673
Pvu1g0842 670 PANTHER METAL-NICOTIANAMINE TRANSPORTER YSL1 12 669 - -
Pvu1g0842 670 PANTHER OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED 12 669 IPR045035 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0842 Pvu-Chr1 13421084 13424772 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0842 - - gmx:100785643 1219.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0842 1 13421084 13424772 Pvu4g0961 4 21588270 21591559 PCT