Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0833 ATGGGCTGCTTCGTGTCCACTCCAAAGGATTCTGGTGGAAGTAGAAGAAGACCAGGGAGTATTGGGGAGGTTTCTGTGTATGTTCCCGGTCTAAGAATTCCTAAACCTGTTGATTTTGCCCTGTCACTTGGTGACTACTTGTCCAAGAATATAGTGGAACGCCTGTCTGCGCTTAGAACTCGTATAGTCGTAATGGCTGGTCAAGAAGGGCCTACAATTACAAGAACAAAAAGGAAAAGTGCCACCCAACATGGAGGTTCAACACTGGCTGATCTTCAGCAGGCTCTTGAAGACTACTTGCCAGTACTCTTGGGATTAGTCGAAAATGGAAGCCATTTACAATACAAATTACAATTTGCTTGGGTGAATCAGGAGGATGATGCAGAGGAAACAGCCATGTCAAATGCCTGGTATGAGGTGTTGTCAGTTTTGCACTTGATGGCTACGTTATTATTATCACAGGCCAATTTATTACTTCTTCCCAGAATGTCCACTGATGGTCATCAGCCAAAAGTATCAGAAGAAAGCAGACGAGCTTCTGTCGATATCTTCCTTAAGGCAGCTGGGTATCTTGATTGTGCTGTAAGGCATGTTCTTCCACAGTTGCCTGCCGAACTCAGGAGAAGTTTACCTGTAGACCTTGCAGAAGGAGTTCTTCGAGCACTTTGTCTGCAAGCATTGGGACAGGGTGTAGATATCCAACTTGGAATGGCAATTGATAGTGCCAAAGCCACTCTTGCAGTGAAGCGTAGACTTGCATGTGAGATGGTGAAATATTGGCAGCAGGCTCAAGATAATATTATGAACCTTCCATTAGCAAATGGTTGGGGTGAAAAACATCGTCTCTTTGTGAAATGGAAGTATATTGAGGCAAAGGCTGCAGCATATTATTATCATGGATTGATTCTTGATGAGGGAAACACGGAGAAATCTCATGGGATGGCTGTAGCTGCTTTACAAGCTGCTGATGAGTATTTCAAAGAAAGTAAGAAGCTGTGTGAAGCATTTAATGCGGCACCCCCATTGTCAAGAAATCCACCACTTTGGGGGACAATGAAATATCTTTTCGAGAAAATTCCTAAGGATACTTCAAGCAAGGTGCGAATAAACCGGGATCTGTATTCCTATGAGAGAATCATGGAAACAGCACCAACGTTGCCTGATTTTGCCTTGGCTTTGAAACCAGATGAATATCAACTTCCTCAGGTGGATTCCTCTTGGAGAACAGAACATGTGAAGGGGGCACAAAGTGGTGCCACCAATCATCTCAATGGATGA 1278 0.439 MGCFVSTPKDSGGSRRRPGSIGEVSVYVPGLRIPKPVDFALSLGDYLSKNIVERLSALRTRIVVMAGQEGPTITRTKRKSATQHGGSTLADLQQALEDYLPVLLGLVENGSHLQYKLQFAWVNQEDDAEETAMSNAWYEVLSVLHLMATLLLSQANLLLLPRMSTDGHQPKVSEESRRASVDIFLKAAGYLDCAVRHVLPQLPAELRRSLPVDLAEGVLRALCLQALGQGVDIQLGMAIDSAKATLAVKRRLACEMVKYWQQAQDNIMNLPLANGWGEKHRLFVKWKYIEAKAAAYYYHGLILDEGNTEKSHGMAVAALQAADEYFKESKKLCEAFNAAPPLSRNPPLWGTMKYLFEKIPKDTSSKVRINRDLYSYERIMETAPTLPDFALALKPDEYQLPQVDSSWRTEHVKGAQSGATNHLNG* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0833 425 ProSiteProfiles BRO1 domain profile. 25 425 IPR004328 -
Pvu1g0833 425 PANTHER ENDOSOMAL TARGETING BRO1-LIKE DOMAIN PROTEIN 1 422 - -
Pvu1g0833 425 PANTHER UNCHARACTERIZED 1 422 IPR038898 -
Pvu1g0833 425 Pfam BRO1-like domain 96 331 IPR004328 -
Pvu1g0833 425 Gene3D alix/aip1 like domains 35 415 IPR038499 -
Pvu1g0833 425 CDD BRO1_Alix_like 23 400 - -
Pvu1g0833 425 SMART BRO1_2 25 403 IPR004328 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0833 Pvu-Chr1 13185366 13195476 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0833 - - gmx:100781733 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0833 1 13185366 13195476 Pvu1g0833 1 13185366 13195476 ECH