Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0831 ATGGCAGATCATCAGAGACTGAGGATCCACCCTATGGAAGGGGAAGCACCACCTCCCCCAACAACCCCATTGGTACCTCCCGGCTCCTCAAGATCAGAAAAGGGTATCCCTTTACACCATCCTCCCCTGCTACGTTCTGTGCCAGCAGTATACTCTAAACCACGGAAAAGAAGCTGCTTCTGCAAGTGCATGTGTTGGACAATAAGCTTGTTTGTTCTCCTCCTCGTTATCTTGGCTGCAACTATTGGAATCCTTTACCTAGTCTTCAAACCAAAACTTCCAGATTACTCAGTTGACACACTCAGGATAAGTGATCTGAGGCTTAACTTTGACATGAGTCTGTATGCAAAGTTTGATGTGAAGATCACAGCAAACAACCCAAACAAGAAGATTGGCATCTACTATGAAAAGGGTGGAAAGATAAGTGTGTGGTACACAAACACAAGGCTTTGTGAAGGGTCACTGCCCCAGTTCTACCAAGGTCACCAGAACAAAACAGTGCTCAATGTGTCCTTGAGTGGTCAAGTGCAGTCTGGAAGCACCTTAATGACGGCACTGCAGCAACAACAGCAGACAGGACGCATTCCATTGGATCTGAAGGTGCATGCACCAATAGCCATCAAACTTGGGAGGTTGAAGCTGATGAAGGTCAAAGTCTTGGGAGAATGCCTGTTGGTGGTGGATAGCTTATCATCTAATAATCTCATAAGCATCAAGGCTAGCAACTGCAAATTCAGAATGAAACTTTGA 750 0.4573 MADHQRLRIHPMEGEAPPPPTTPLVPPGSSRSEKGIPLHHPPLLRSVPAVYSKPRKRSCFCKCMCWTISLFVLLLVILAATIGILYLVFKPKLPDYSVDTLRISDLRLNFDMSLYAKFDVKITANNPNKKIGIYYEKGGKISVWYTNTRLCEGSLPQFYQGHQNKTVLNVSLSGQVQSGSTLMTALQQQQQTGRIPLDLKVHAPIAIKLGRLKLMKVKVLGECLLVVDSLSSNNLISIKASNCKFRMKL* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0831 249 Pfam Late embryogenesis abundant protein 121 209 IPR004864 -
Pvu1g0831 249 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 30 247 - -
Pvu1g0831 249 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 30 247 - -
Pvu1g0831 249 MobiDBLite consensus disorder prediction 1 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0831 Pvu-Chr1 13176443 13177425 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0831 57 249 EF-hand Containing Proteins AT5G21130 27.835 3.23e-29 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0831 - - gmx:100813932 421.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0831 1 13176443 13177425 Pvu1g0831 1 13176443 13177425 ECH