Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0827 ATGGCTACTGTTTTGGGTTTGGTTCTGGTGGGGTTTGGTCTCGGGGTGTTGGCCGTTGTTGCTGCGGAAGCTCTGGGGTTGTTATGGATCATGAAAAGGTTGCGCCACAAGAGCAATAACGACGAAGCCTACTTCTCCTCCAAGACCCTAACTACTGAGCTGCTTGATCCCCAACAGTCTCTGGATTTTGCGTTTAGAAAGCAGGGTGTGGTTTGGGTTTTAGAATCTGGAAAAATTACAAAACAATCAAGGGAGCAAAAAAAGAAAAGTGATCTCTTGGAGGTTTCCCCTGTTAAGATGTATGGACAAATCAAGGGCCAATCGCTTATTCTTAGAAAACCTGATGGTTTGCACACAACGATTGAACTCAAGGGCTGTTCAGTTCAAGCCGTGTCCGCATCAATACTTTCTTCAAGAAAATGGGCAAAGAAGTTCCCTATCAAAGTGGAAAGCAAAATCTCTGTCATATACAATGGAAACAAAACTATTTATATATATCTTGACACTTCGTGGGAGAAAGAAGCATGGTGTAAGGCCCTCTATCTGGCTTCATGTGATCAAAAAGAAAAAATCAAATGGTTTACCCAGTTGGATGATGAGTTTCATAGTTATCTGACATCCTTGAACTCTGTATACCATTCTTTTATGAAACCATCGGTTGGATCAGGTGTTGAAGTGATAGAAAGGGCTAGTAAGCCTGATGGTTCTTCCTCAAAGGTTAAGCAATTTTGGAGAAAGGTTTCTAAAAGAACTTCCCGAGTTGGTATGGAAAATATATCAACTCGATCTTCACAATTAGGTAATGAAGGGAAAAAGACCACTGAGAAGCTTCGGGCTTGCCAAGATGCAATTTTGGCTACTGGTTTGTTTAAGACTGCTTCAACATCAAAGCTTCTAAATGATTCCATAGTAGACAATGAGAAGTTTGGTATTGATGAAGGAACATTATGTTGGAATTTGTTGATTTCTCGGCTCTTTTTCGATGCCAAAGGAAATGAGAAATTAAAGAGATCCATGCAAGCAAGGATTCAGAAAACATTGTCCAACATGAGAACTCCGGGTTATATTGGTGAAGTCATCTGTACCAATATCAATACTGGGAATGTTCCACCTTGCATTGTAGGAATGCGGGTTCTTCCTATGGAAATGAGTGAAGTATGGGCCGTAGAAGTTGACATTGAATATTCTGGAGGTGCACTATTAGAGATTGAAACAAGGCTTGAGCCTCGTGAACTAGAGCTTGATGCAGGGACAGAAAACTCAAATCCACAGCCAAACAATGCTGGAGCTGTCCCTTCAGATCTTCTTGAAGATTTTAAATATTTTGAAGAGCAATTGAATTTTGAGGAAAGAACGAATGATTTACAAGAGCACAAAGAAGAAGGTGATTGGAACTCGGATGTTTCTAAGAGCTTTAAGAGCACTATGCCTTCGTTGAATCATGGATCAAGATGGAAATCTATATTAAAGTCCGTGGCCAAGCAGGTTTCACAGGTTCCTCTGTCCTTGGCAATAAGAGTGGCTTCCCTTAGAGGGACATTGCGCTTGCATATAAAGCCACCTCCCTCTGATCAATTGTGGTATGGTTTCTCATCAATGCCAGACATTGATTTCAACATGGAGTCATCTGTTGGAGATCGTAAGATAACAAGTGCGCACATTGCTTTATTCCTGGTCAACAGGCTAAAGACAGGAATTCGGGAAACTTTGGTGCTCCCAAACTGTGAAAGTGTATGCATCCCATGGATGTTAGCTGAAAAGGATGATTGGGTTCCTCGAACTGTTGCTCCATTCATATGGGTTAACCAAGAATTTACAAACGAGACTTCAACTTCAACTTATACCAATAATCAACCTTCTGGTAGAGTTGAAGCCAGTGGTGATACAATCTCAAATAATAATTCAGGGCACAAACAACAAAATTCAACTAGTGCTGAATCTAGTCAAGAAGAAACTAGGAAATCATCAGATTCTCTAGCACTCCCATTAAATTCCTCTGATTCAGTAACATTAGAAAGCAACAGGAGTTTGGAAGAGGCGGATGCACCATTGTTAGAGAATGACATACCTCAAAAGACTAAAGATTTGAAAGAATTTAAGACATCATCATTACAAAATGACAAACCACTTGAGACTACCGAGCAAAATATGGAGAGTAATTCTGAGTTTCAGTCAGAACATAGAGGTGTGCCGATGGAGAGTCGAAATCATTCTATTGAGCAGGAAGATGGACTGCCAAAAAAAATGGGGAGGAGAGAAAGGATGTTTGATTTGGGAAAGAAGATGAGTGAGAAATTGGAAGAGAAAAGGCGTCACATTGAAGAAAAGAGCAGACATATTGTTGAGAAGATTCGTGGTCCATAA 2364 0.404 MATVLGLVLVGFGLGVLAVVAAEALGLLWIMKRLRHKSNNDEAYFSSKTLTTELLDPQQSLDFAFRKQGVVWVLESGKITKQSREQKKKSDLLEVSPVKMYGQIKGQSLILRKPDGLHTTIELKGCSVQAVSASILSSRKWAKKFPIKVESKISVIYNGNKTIYIYLDTSWEKEAWCKALYLASCDQKEKIKWFTQLDDEFHSYLTSLNSVYHSFMKPSVGSGVEVIERASKPDGSSSKVKQFWRKVSKRTSRVGMENISTRSSQLGNEGKKTTEKLRACQDAILATGLFKTASTSKLLNDSIVDNEKFGIDEGTLCWNLLISRLFFDAKGNEKLKRSMQARIQKTLSNMRTPGYIGEVICTNINTGNVPPCIVGMRVLPMEMSEVWAVEVDIEYSGGALLEIETRLEPRELELDAGTENSNPQPNNAGAVPSDLLEDFKYFEEQLNFEERTNDLQEHKEEGDWNSDVSKSFKSTMPSLNHGSRWKSILKSVAKQVSQVPLSLAIRVASLRGTLRLHIKPPPSDQLWYGFSSMPDIDFNMESSVGDRKITSAHIALFLVNRLKTGIRETLVLPNCESVCIPWMLAEKDDWVPRTVAPFIWVNQEFTNETSTSTYTNNQPSGRVEASGDTISNNNSGHKQQNSTSAESSQEETRKSSDSLALPLNSSDSVTLESNRSLEEADAPLLENDIPQKTKDLKEFKTSSLQNDKPLETTEQNMESNSEFQSEHRGVPMESRNHSIEQEDGLPKKMGRRERMFDLGKKMSEKLEEKRRHIEEKSRHIVEKIRGP* 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0827 787 MobiDBLite consensus disorder prediction 705 727 - -
Pvu1g0827 787 SUPERFAMILY PH domain-like 78 193 - -
Pvu1g0827 787 MobiDBLite consensus disorder prediction 728 787 - -
Pvu1g0827 787 MobiDBLite consensus disorder prediction 609 675 - -
Pvu1g0827 787 MobiDBLite consensus disorder prediction 609 787 - -
Pvu1g0827 787 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 312 581 IPR031468 GO:0008289
Pvu1g0827 787 PANTHER TESTIS-EXPRESSED SEQUENCE 2 PROTEIN-LIKE ISOFORM X1 7 786 - -
Pvu1g0827 787 MobiDBLite consensus disorder prediction 688 704 - -
Pvu1g0827 787 PANTHER TEX2 PROTEIN-RELATED 7 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0827 Pvu-Chr1 13087297 13095805 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0827 - - var:108326201 1382.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0827 1 13087297 13095805 Pvu1g0827 1 13087297 13095805 ECH