Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0818 ATGTCTTTCGTGCGTTCACCTTCAAAGTCTCAAGTTCAAAGTCCTCAAACCACTCATGTAGTTCCCCCGAACTGTTCTCCAAATCTTCTCAAGCGAATGCAGCAAGACAGCTGCTTCATTTGTAACCAACGTGGACATTGGTCTTGGTACTGTCCTTCCAAATCCCCCAATTCTAAACCCGTTTCACCCTCTCCCAAGCAAGGTTCCCAAGTTTCCTCCAACGCTATACAATGCCGTTGTGGCCATGGTGCGTGCGAAACCAAAGCAGCACGCTGTGGGAGGGAATTCTATACCTGTCCCATCAAAAGGGGGGTAAAATGTAAGGACATTGTTAAGTGGTGCGATGATCCTGTTTCTGAGAGAGATTTGCAGCCTCCAACGATCAAGTATCCTGAGTGTCCATGTAAGGCTGGAGTTTGTAGAAGGGTTAAGGGTAAAGAGACAGATGACGTTTTTAAGTACTATTTTACTTGCCCTGTAAAACAGGGTCATGGATCTTGTGGATACTGTGTGTGGGAGGATGAGATTAAACTGCTTGATAGAACAAGCATTGTTCCTATCCAGCGAAGCAGGCAAAGGACTCTTGGTGAATTTTGGAATGGATGCCAAACTGATGATGAGCTGGGTGATGAACTCAGTAAAAGGATGAGAGTTACGGACTATTCTGAGGATCCCTCGGCTGTGCCTTACATTCCCGACAAAGAAGATGCTGGTGTAGCACTAACTGTAGCAAATTTGAATCGCGATGGTTTTCCAGATTTGGTGGTTGATGATGATGATGATTTCGACTTTACAAACCCGGTATCGTGGGAGACTATTGAGGAAGAAGCATTTCTATTATTATCTCGTGTGTCAACACCTTCAAGGATCCGTTGGCGACAAATTATGTTTGAGAGGCACATTTCCTCTGATGTTTCATTTGGTTCTTGTCGAATGGGTTGGCTTGGCCGTCTTCTTTTCTTCCATCCAGCTCAAAGTTTGAAACTCCCCCTACCTAAGCCATTTTTCTGCTGCATTTTCCCATCCTTTAATCCAATAATTGTCCCTAAGCACAGGAATGCTTCTGATGGGCCTTGCAACCAGCTTGCTATCAAAAGTGTTAGTCAACAACATCCCCAATTTTCAACTGGTTGCCATACTGAGGTTTCTGGACATGTAGTTGGTCCCAGCAAAGTAGAAGACGGTGAAAGAAAGTCAAAGGCATCAAGGCATAGAGTGATCTTGTTTACACAGAAACAACTTCTCGCTGATCTAGAAACCTTGGCTCTTCACGAGCTTGAGTCCATGAAAGAGGCAGCAGAGACCGCTTTTGCAATATTAAATGATTTACGGGTTGACTATAAAAAATTTTCTGATCATGTCTTGGACTATATCAATTTTGCATCATCAATTGCAGAAATAGATAAGTCTAAGGAAAACTTACTTACTGTGGAGGATCTCAACAAACTCTTCGAGGAGGAGAAAATGAGATTTGCTCAACTCCAAGATGAGCATACCAAGACCAAAGCTTTGCTTGTAGTATCAAAACGACAAAGACAATTGCTTTGTGAACAGGTCTCTAATCTCGAGGCTATGCTCAATGAAAAACAAAATCAATTAAAGTTTTGTGAGTTGGAGACCATAAAGATTGAAACTCGCCTTGGTGATTTGGAAAGGAATATATCGGTGACAGATATAGCTCTGCAGGAAAGAGCTGAGCAAACAAAAGTGGCAAAGAAACAAAGTGACGAAAGACATGCAAAGCAAATTGCAGCTCGGGAAGCACTGCAGAAGGCTAAACTTGAATTGGAAAATTGA 1797 0.4274 MSFVRSPSKSQVQSPQTTHVVPPNCSPNLLKRMQQDSCFICNQRGHWSWYCPSKSPNSKPVSPSPKQGSQVSSNAIQCRCGHGACETKAARCGREFYTCPIKRGVKCKDIVKWCDDPVSERDLQPPTIKYPECPCKAGVCRRVKGKETDDVFKYYFTCPVKQGHGSCGYCVWEDEIKLLDRTSIVPIQRSRQRTLGEFWNGCQTDDELGDELSKRMRVTDYSEDPSAVPYIPDKEDAGVALTVANLNRDGFPDLVVDDDDDFDFTNPVSWETIEEEAFLLLSRVSTPSRIRWRQIMFERHISSDVSFGSCRMGWLGRLLFFHPAQSLKLPLPKPFFCCIFPSFNPIIVPKHRNASDGPCNQLAIKSVSQQHPQFSTGCHTEVSGHVVGPSKVEDGERKSKASRHRVILFTQKQLLADLETLALHELESMKEAAETAFAILNDLRVDYKKFSDHVLDYINFASSIAEIDKSKENLLTVEDLNKLFEEEKMRFAQLQDEHTKTKALLVVSKRQRQLLCEQVSNLEAMLNEKQNQLKFCELETIKIETRLGDLERNISVTDIALQERAEQTKVAKKQSDERHAKQIAAREALQKAKLELEN* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0818 598 ProSitePatterns EF-hand calcium-binding domain. 468 480 IPR018247 -
Pvu1g0818 598 MobiDBLite consensus disorder prediction 1 20 - -
Pvu1g0818 598 PANTHER ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN 153 598 - -
Pvu1g0818 598 PANTHER ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN 6 143 - -
Pvu1g0818 598 SMART c2hcfinal6 37 53 IPR001878 GO:0003676|GO:0008270
Pvu1g0818 598 Coils Coil 512 539 - -
Pvu1g0818 598 SUPERFAMILY Retrovirus zinc finger-like domains 32 57 IPR036875 GO:0003676|GO:0008270
Pvu1g0818 598 PANTHER OS07G0190500 PROTEIN 153 598 - -
Pvu1g0818 598 PANTHER OS07G0190500 PROTEIN 6 143 - -
Pvu1g0818 598 Coils Coil 467 497 - -
Pvu1g0818 598 Gene3D - 31 67 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0818 - - vra:106766599 887.486