Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0814 ATGGACTATTGCTTGAGAGAGTTAGAGGGGAAGCAAGCACATGACCCTTTATTGATAGAGAAAATGAATAATTCATCACAAAGTAGTAGTAGTGAGAGATGTGTGTGGGTTCCAGGACCAGTGATTGTGGGAGCAGGGCCTTCAGGGCTTGCAACAGCAGCATACCTGAAAGAGAAAGGAGTTCCAAGCCTAATCCTGGAGAGATCCAACTGCATAGCATCTTTGTGGCAACTCAAGACCTATGACAGGCTTCACCTCCACTTGCCAAAGCAGTTTTGTGAACTCCCCTTGATGGGGTTCCCTTGTGAATTCCCCACATACCCCACAAAACAACAGTTCATAGAGTACTTGGAGAGCTATGCTGAGAGGTTTGCCATTAGGCCACGGTTCAATGAGACCGTTAGGCATGCCGAGTTTGATGCCACTCTTGGGTTATGGAAGGTGAGGAGTTTTAACAAGAGGGAGGTGGCAACAGAGTTTGTGTGTAGGTGGCTGATTGTGGCCACCGGGGAGAATGCAGAGGCAGTGGTGCCTCGGATTGAGGGAATGGGGGACTTTGGTGGGACCATAAAGCACACAAGTCTGTACAAGAGTGGGGCAGAGTTTAGAGGGAAGAGAGTGTTGGTGGTTGGGTGTGGGAATTCAGGGATGGAAGTGTGCTTGGATCTTTGCAACCATAATGCTACTCCTTCTCTTGTGGTCAGAGATACAGTACATATCTTACCACGAGAGATGCTGGGAAAATCAACTTTTGGGTTGTCCATGTGGTTGCTCAAGTGGCTTCCAATTGAGTTTGTGGATCGGTTTCTTCTCATAGTGTCATGGCTCATGCTTGGTGACACGGCTCGGTTCGGATTGGACCGGCCAAAACTGGGTCCCCTTCAACTCAAAAACCTCTCCGGAAAGACACCAGTGCTTGATGTGGGTACCCTTGCCAAGATCAAAAGTGGACATATAAAGGTACGACCAGCCATCGACCGGTTAAAACGTTATACAGTTGAATTTGTTGATGGAAGGACAGAGATTTTTGATGCCATCATTTTGGCAACTGGTTACAAAACTAATGTGCCCTATTGGCTAAAGGAAGGGGATATGTTCTCTAAGGAAGATGGGTTCCCTACGAAGCCATTTCCAAATGGATGGAAGGGTGAGAATGGACTGTATGCAGTTGGTTTCACCAAACGTGGCCTTCTTGGTACATCAATGGATGCCAAGAGAATAGCTGAACACATCGAAAGATGTTGGAACCACTTTTTCCCACTCACTTAA 1269 0.4712 MDYCLRELEGKQAHDPLLIEKMNNSSQSSSSERCVWVPGPVIVGAGPSGLATAAYLKEKGVPSLILERSNCIASLWQLKTYDRLHLHLPKQFCELPLMGFPCEFPTYPTKQQFIEYLESYAERFAIRPRFNETVRHAEFDATLGLWKVRSFNKREVATEFVCRWLIVATGENAEAVVPRIEGMGDFGGTIKHTSLYKSGAEFRGKRVLVVGCGNSGMEVCLDLCNHNATPSLVVRDTVHILPREMLGKSTFGLSMWLLKWLPIEFVDRFLLIVSWLMLGDTARFGLDRPKLGPLQLKNLSGKTPVLDVGTLAKIKSGHIKVRPAIDRLKRYTVEFVDGRTEIFDAIILATGYKTNVPYWLKEGDMFSKEDGFPTKPFPNGWKGENGLYAVGFTKRGLLGTSMDAKRIAEHIERCWNHFFPLT* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0814 422 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 27 417 - -
Pvu1g0814 422 SUPERFAMILY FAD/NAD(P)-binding domain 203 413 IPR036188 -
Pvu1g0814 422 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA6 27 417 - -
Pvu1g0814 422 Pfam Flavin-binding monooxygenase-like 42 359 IPR020946 GO:0004499|GO:0050660|GO:0050661
Pvu1g0814 422 Gene3D - 40 417 IPR036188 -
Pvu1g0814 422 PRINTS Pyridine nucleotide disulphide reductase class-II signature 39 61 - -
Pvu1g0814 422 PRINTS Pyridine nucleotide disulphide reductase class-II signature 202 226 - -
Pvu1g0814 422 PRINTS FAD-dependent pyridine nucleotide reductase signature 40 59 - -
Pvu1g0814 422 PRINTS FAD-dependent pyridine nucleotide reductase signature 206 224 - -
Pvu1g0814 422 PRINTS FAD-dependent pyridine nucleotide reductase signature 344 366 - -
Pvu1g0814 422 SUPERFAMILY FAD/NAD(P)-binding domain 41 312 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0814 Pvu-Chr1 11870824 11876387 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0814 K11816 - gmx:100804746 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0814 1 11870824 11876387 Pvu1g0814 1 11870824 11876387 ECH