Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0812 ATGGAGAGCTCTGTTTCTGGTCTGTCTCCTCTTGGTGCACTGGAACAACGCTACGCTGGGACAGAGGGGGCTCTACCTATTGATCACACTCCGACGATCAAGTCAGGTGACAATAAAGAATTAAAGATCAACTGGAAACGGGTGTCTACAACCAGCTTGTTTGGGTTAGGATTTGTTGGCCCGCAAGACTTGTCATTCAACCTTGTAAGATTGAAGAGTTTTCAAGATATGATTGATGCTATAGGTGCTTATGGACATAATTTGCGAGCTCCTACTTATCTTGAAATTAGACTTCAACTTCTCAACAAGGAGGAAACAATAGTGAAGTCATTCAATAACCATGAAAGTAAATACAAGAATGTCTTTGCAATCATTGATAATAGATGGATATGCCAAGTTCATCGCCCCTTGCATGTGGTTGGTCACTTTGTGAATTCAGAGTTCTATTTTTCCAACCTAGAAATGGAATATGATTTGAAGGTTACAAATGGATTGTATGCTTGCATCAAGAGGTTGGTGCCAAGTAAAGATGTGCAACAATTTTTTTTAATTGAGTTGACTCTTTATAAGAGTGGAAGTGGACTCTTTGGTAATGACTTTGCCAAAGAATCAAGGAAGACCACAACCCTAGAAAGGTCTAGTGCAACTTCAACCCCAACAAGGAAGGGCAAAATGAAGATTCAAATTGGGGTTGAGAATGAATTGCATGATAACTCTAATTTCAAGTTTGAAAAATTACTTAATTTTGATAAGAGTTTCTATAAGGGGAAGAGGAGGAGGGATATCTCCCGTTGTATAATTTTGAAGACAATTATGCTGGGATTGAAGAAGTACGAAGGTTTGGATCGGTTTATAAGATTGAAACTCATGCTTAAACCGAATTCCTTCCGTTTTGTTGCCACTAAAGTTGCTGTTGATGGGTTTATCTTTGGACCATTGGATTTACTTGTGTTTTTTACGTACATGGGTTTTTCTGCTGGAAAGACTGTTCCTCAAATAAAAGAAGATGTTAAGAGAGATTTCCTCCCAGCCTTTGTTTTAGAAGGAGGCATATGGCCAATTGTTCAGGTTGCAAATTTTCGGTTTATACCTGTGAGCTGTTTCTTGTCTTGGGTTGAGCAACAGCAGGATGCACCTTGGAAACAATGGTTGAAATCACTTCTACCTTTGAAGTAA 1176 0.3886 MESSVSGLSPLGALEQRYAGTEGALPIDHTPTIKSGDNKELKINWKRVSTTSLFGLGFVGPQDLSFNLVRLKSFQDMIDAIGAYGHNLRAPTYLEIRLQLLNKEETIVKSFNNHESKYKNVFAIIDNRWICQVHRPLHVVGHFVNSEFYFSNLEMEYDLKVTNGLYACIKRLVPSKDVQQFFLIELTLYKSGSGLFGNDFAKESRKTTTLERSSATSTPTRKGKMKIQIGVENELHDNSNFKFEKLLNFDKSFYKGKRRRDISRCIILKTIMLGLKKYEGLDRFIRLKLMLKPNSFRFVATKVAVDGFIFGPLDLLVFFTYMGFSAGKTVPQIKEDVKRDFLPAFVLEGGIWPIVQVANFRFIPVSCFLSWVEQQQDAPWKQWLKSLLPLK* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0812 391 PANTHER PEROXISOMAL MEMBRANE 22 KDA (MPV17/PMP22) FAMILY PROTEIN 275 390 - -
Pvu1g0812 391 PANTHER PEROXISOMAL MEMBRANE 22 KDA (MPV17/PMP22) FAMILY PROTEIN 35 62 - -
Pvu1g0812 391 Pfam Mpv17 / PMP22 family 323 365 IPR007248 GO:0016021
Pvu1g0812 391 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 35 62 IPR007248 GO:0016021
Pvu1g0812 391 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 275 390 IPR007248 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0812 Pvu-Chr1 11796036 11804340 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0812 K13348 - pvu:PHAVU_001G078700g 789.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0812 1 11796036 11804340 Pvu1g0812 1 11796036 11804340 ECH