Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0811 ATGGCGCAACTTGGTTTCCCAGTCAAATTACAATCAATGTCATGCAAACTCTCTCACAATCACATTCACATTCACACTCGTAAATCCTCTTTCTTTTCTCACTCTCTCCCTCCCTTTCCCACTTTCACCACCAAACCCTCTCTCCATCTCCGACCTAACCACCACCCTTTATCCGCCTTTCGCCACCGTACTATCGCACCCTGCAACTGCAACAAATTAGATATCATCTCGCAATTGGAAGGGAAACCGAAGAAACGAGTCAACGGTATATTCTGGATCATTCTCCTCAACATTGGCGTTTTCGTCGCAGACCACTTTTTTCATGTTAATGGGGCAAAGACTTTGTACTTGTACCACCCTCGGCCAGCTTGGTACCAGTTTGTCACAGCTACATTTTGTCATGCTAATTGGAAGCATCTTTCTAGCAACCTTTTCTTCTTGTACATTTTTGGAAAGCTTGTTGAAGAAGAGGAAGGGAACCTTGCTTTGTGGCTTTCTTACATTCTTACTGGTGTAGGAGCAAACCTCGTTTCATGGTTGGTTTTACCTAGAAATACAGTTTCTGTTGGAGCTTCTGGTGCTGTTTTTGGGTTATTTACTATCAGTGTCCTTGTAAAGATGTCCTGGGACTGGAGGAAGATCCTTGAAGTGCTTATACTGGGTCAGTTTGTTATAGAGAAGGTTATGGAAGCAGCCCAAGCTTCAACATCTTTATCAGGATTTAAAGGAGGCTATGCATTGCAAAGTGTAAATCACATTGCACATCTTTCTGGTGCTCTTGTTGGTGTGCTTTTGGTTTGGCTTCTTAGCAGAGTTCCTTCTGATGATTCTTCATACCAATAA 843 0.4282 MAQLGFPVKLQSMSCKLSHNHIHIHTRKSSFFSHSLPPFPTFTTKPSLHLRPNHHPLSAFRHRTIAPCNCNKLDIISQLEGKPKKRVNGIFWIILLNIGVFVADHFFHVNGAKTLYLYHPRPAWYQFVTATFCHANWKHLSSNLFFLYIFGKLVEEEEGNLALWLSYILTGVGANLVSWLVLPRNTVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTSLSGFKGGYALQSVNHIAHLSGALVGVLLVWLLSRVPSDDSSYQ* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0811 280 PANTHER RHOMBOID-RELATED PROTEIN 46 276 - -
Pvu1g0811 280 PANTHER RHOMBOID-LIKE PROTEIN 11, CHLOROPLASTIC-RELATED 46 276 - -
Pvu1g0811 280 Gene3D - 84 276 IPR035952 -
Pvu1g0811 280 Pfam Rhomboid family 122 271 IPR022764 GO:0004252|GO:0016021
Pvu1g0811 280 SUPERFAMILY Rhomboid-like 87 273 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0811 Pvu-Chr1 11787539 11791451 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0811 - - gmx:100781449 407.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0811 1 11787539 11791451 Pvu1g0811 1 11787539 11791451 ECH