Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0802 ATGGAGTCCTCTGTTGCTGCAGAGCAGAAGCTCTTGGAAAATGGCACTTCATCTCAATCTTCTTCCTCTTCCTCTCCGCCGATAAGAAAAGGTGGTTTGAGAACCATGCCCTTCATCATAGTGAACGAGTGTTTGGAGCGAGTGGCGAGCTACGGGATCATGCCCAACATGATACTGTACCTGCTGAACGATTACGGCATTCCTATTGCCAAGGGCACAAGCATAATTTACGCTTGGTCTGCCACCTCCGACGTCTTGTCCATCTGCGGCGCCTTTCTCTCCGATTCTTACTTGGGTCGATTCCTCGTCATTTCTATTGGATCATTCTCCAGCCTTCTT 339 0.4926 MESSVAAEQKLLENGTSSQSSSSSSPPIRKGGLRTMPFIIVNECLERVASYGIMPNMILYLLNDYGIPIAKGTSIIYAWSATSDVLSICGAFLSDSYLGRFLVISIGSFSSLL 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0802 113 MobiDBLite consensus disorder prediction 1 32 - -
Pvu1g0802 113 Gene3D MFS general substrate transporter like domains 5 113 IPR036259 -
Pvu1g0802 113 PANTHER PROTEIN NRT1/ PTR FAMILY 1.2 27 112 - -
Pvu1g0802 113 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 27 112 IPR000109 GO:0016020|GO:0022857|GO:0055085
Pvu1g0802 113 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0802 Pvu-Chr1 11562423 11563022 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0802 14 113 Organic Solute Cotransporters AT1G52190 55.000 7.36e-33 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0802 - K14638 pvu:PHAVU_001G0778001 212.231