Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0801 ATGAGGATCGAGGAAGAGAGTGATGGAGTCTCCGCTTCCACAAAGCACCTAGTATTTGCTTATTATGTTACTGGGCATGGTTTTGGCCATGCCACTCGAGTCACTGAGGTGGTGCGGCATTTGATTCATGCGGGGCATGATGTTCACGTCGTCACTGGTGCTCCTGATTTCGTTTTCACCACTGAAATACAGTCTCCTCGATTGTTCATTCGCAAAGTGCTTTTGGATTGTGGAGCTGTTCAGGCAGATGCGTTGACTGTTGATCGCCTTGCTTCTCTGTCTAAGTATTCTGAAACAGCAGTGAAGCCCCGTGCACAAATCTTGGCTCAAGAATCTGAGTGGCTGAACTCTGTCGAAGCTGACTTAGTGGTCTCAGATGTTGTTCCTGTTGCATGTCGAGCAGCAGCCGATGCCGGCATTCGCTCCGTTTGTGTGACCAATTTCAGTTGGGACTTCATCTATGCTGAATATGTCATGGCTGCTGGACTTCATCATCGTTCAATAGTTTGGGAGATAGCGGAGGACTATTCACATTGTGAGTTCCTTATCCGCCTCCCGGGATATTGCCCAATGCCTGCTTTTCGTGACATTATTGACGTCCCTCTCGTAGTAAGGAGATTGCACAAATCTGCAAAAGAGGTGAGGAAGGAACTTGGGGTAACTGATGATGTGAAGCTAGTTATTCTCAACTTTGGTGGGCAGCCATCAGGATTGAAGCTAAAGGTGGAATTCTTACCGCCTGGCTGGTTGTGTCTGGTTTGTGGTGCTTCTAAGAGTGATGACCTTCCACCTAACTTTATGAAACTTGCTAAGGATGCATATACGCCTGACATTATTGCAGCATCTGACTGTATGCTTGGGAAAATTGGATATGGCACAGTTAGCGAGGCGTTGGCATACAAGTGTCCTTTTGTATTTGTACGAAGAGATTATTTCAATGAAGAACCTTTTTTGAGAAATATGCTTGAGCATTATCAATGTGGTGTTGAAATGATTAGGAGGGATTTACTGACTGGTCATTGGAGACCTTATCTTGAACGTGCAATAAGTTTGAAACCCAGCTATGAGGCAGGCATTAATGGTGGCGAGGTGGCAGCACGCATCCTGCAGGAGACAGCTTTGGGAAAAAATTATGCATCAGATAAGCTTAGTGGGGCTAGAAGGTTGCGTGATGCCATAGTTCTTGGGTATCAACTCCAAAGGGCCTCTGGCCGAGATATTACAATCCCAGAATGGTATGCAACTGCTGAAGACCAGCTTGGGCACTCAACACCTGTTTCCCCTGTGGATGATGGAAGCTTTGCATTAAGCCCGGACTTTGAAAACTTTGACATTCTTCATGGAGATGTGCAAGGACTTCCAGATACTATGGCATTCTTACGTAGCCTATCTGAATTAGAGGAGAAGCACAAAAGGCGGGAGCGTAAGGCTGCAGCCAGTCTCTTCAACTGGCAGGAGGACATTTTTGTGACTAGAGCTCCTGGAAGGTTAGATGTTATGGGTGGTATTGCTGACTATTCTGGAAGTCTTGTCCTCCAGATGCCAATTAAGGAAGCCTGCCATGTCGCTTTGCAAAGAATCCATCCTAGTAAACATAGACTGTGGAAACATGCTGAGGCTCGGCAGAATGACAACGGGGGAAATCCAACTGCTGTCTTGCAAATTGTATCATATGGATCAGAATTGAGTAATCGAAGCCCAACATTTGACATGGATTTGTCTGATTTTATGGAAGAAGGCAAACCAATTACATATGAGAAAGCAAAGAGATACTTTGCTCAAGATCCTTCCCAAAAGTGGGCAGCATATGTGGCAGGGACAATTTTGGTCTTAATGACTGAATTGGGTGTTCAATTTGAAGATAGTATAAGCATGCTGGTTTCATCTGCAGTTCCAGAAGGGAAAGGTGTATCATCTTCTGCCTCTGTGGAGGTAGCTAGTATGTCTGCTATTGCAGCTGCTCATGGGTTGGATATCAGCCCAAGGGAACTGGCCATACTCTGCCAGAAGGTGGAAAACCACATTGTAGGAGCTCCTTGTGGTGTCATGGACCAGATGGCTTCAGCATGTGGTGAAGCCAACAAACTACTTGCTATGGTTTGCCAGCCTGCAGAGATTGTTGGTCTTGTTGACATTCCCAGCCATATCCGTTTCTGGGGAATTGATTCTGGAATAAGACACAGCGTTGGAGGTGCAGACTATGGTTCTGTTAGAATTGGCACCTTTATGGGTATGAAGATGATAAAGACCAAGGCTTTTGAGGAATTGTCCAAGAGTTGTGCTGCTAATGGGTTGAGCTATGATGAAGTGGAACAAGATGATCTAGAACTACTTAAACAAGAAGCCTCCTTAGATTACTTATGTAATTTGCCACCTCATAGATTTGAGGGTCTATATGCTAAGTCTCTTCCCGATTCCATTGTTGGTGAGACATTTTTGAAGCAACTTAAAGATCATAATGATCCTGTCACTATTATTGATGACAACCGTACTTACGGAGTTAAAGCTCCCACAACGCATCCAATCTATGAAAACTTCCGAGTCAAGACGTTCAAGGCACTTCTATCATCTGCATCTTCAACCTATCAGCTTACATCTTTAGGAGAATTGCTATATCAGTGCCACTACAGCTACAGTGCTTGTGGACTTGGCTCTGATGGAACAGATAGGCTTGTGCACTTAGTGCAAGAATTGCAACACAGTGCAGAATCTAAAGCTGAAGGTGGGACTTTATACGGAGGCAAGATAACTGGTGGTGGTTCAGGCGGAACAGTTTGTGTGATTGGTAGAAACTGTCTCAAGAGCAGTGAACACATTTTCGAGGTTCAGCAGAGATACAAGAAAGCTACTGGTTATTTGCCTTTTATTTTTGAGGGTTCATCACCAGGTGCTGGAAAATTTGGGTACCTCAGAATACACCGTCGAGCTACCTCCAAAAAGGCTAATACAGGTGAGGATGCTGCTGCAGTCACGCTGGAAAATAGCAGTTGA 2991 0.449 MRIEEESDGVSASTKHLVFAYYVTGHGFGHATRVTEVVRHLIHAGHDVHVVTGAPDFVFTTEIQSPRLFIRKVLLDCGAVQADALTVDRLASLSKYSETAVKPRAQILAQESEWLNSVEADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGLHHRSIVWEIAEDYSHCEFLIRLPGYCPMPAFRDIIDVPLVVRRLHKSAKEVRKELGVTDDVKLVILNFGGQPSGLKLKVEFLPPGWLCLVCGASKSDDLPPNFMKLAKDAYTPDIIAASDCMLGKIGYGTVSEALAYKCPFVFVRRDYFNEEPFLRNMLEHYQCGVEMIRRDLLTGHWRPYLERAISLKPSYEAGINGGEVAARILQETALGKNYASDKLSGARRLRDAIVLGYQLQRASGRDITIPEWYATAEDQLGHSTPVSPVDDGSFALSPDFENFDILHGDVQGLPDTMAFLRSLSELEEKHKRRERKAAASLFNWQEDIFVTRAPGRLDVMGGIADYSGSLVLQMPIKEACHVALQRIHPSKHRLWKHAEARQNDNGGNPTAVLQIVSYGSELSNRSPTFDMDLSDFMEEGKPITYEKAKRYFAQDPSQKWAAYVAGTILVLMTELGVQFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLDISPRELAILCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAEIVGLVDIPSHIRFWGIDSGIRHSVGGADYGSVRIGTFMGMKMIKTKAFEELSKSCAANGLSYDEVEQDDLELLKQEASLDYLCNLPPHRFEGLYAKSLPDSIVGETFLKQLKDHNDPVTIIDDNRTYGVKAPTTHPIYENFRVKTFKALLSSASSTYQLTSLGELLYQCHYSYSACGLGSDGTDRLVHLVQELQHSAESKAEGGTLYGGKITGGGSGGTVCVIGRNCLKSSEHIFEVQQRYKKATGYLPFIFEGSSPGAGKFGYLRIHRRATSKKANTGEDAAAVTLENSS* 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0801 996 Pfam GHMP kinases C terminal 864 937 IPR013750 -
Pvu1g0801 996 Gene3D - 475 713 IPR014721 -
Pvu1g0801 996 Gene3D Glycogen Phosphorylase B; 228 359 - -
Pvu1g0801 996 PRINTS Mevalonate kinase family signature 493 517 - -
Pvu1g0801 996 PRINTS Mevalonate kinase family signature 629 651 - -
Pvu1g0801 996 PRINTS Mevalonate kinase family signature 672 691 - -
Pvu1g0801 996 PRINTS Mevalonate kinase family signature 913 930 - -
Pvu1g0801 996 PANTHER MEVALONATE KINASE/GALACTOKINASE 17 973 - -
Pvu1g0801 996 SUPERFAMILY Ribosomal protein S5 domain 2-like 486 705 IPR020568 -
Pvu1g0801 996 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 23 338 - -
Pvu1g0801 996 Pfam Galactokinase galactose-binding signature 482 525 IPR019539 -
Pvu1g0801 996 Gene3D - 826 951 IPR036554 -
Pvu1g0801 996 Gene3D Glycogen Phosphorylase B; 21 227 - -
Pvu1g0801 996 PIRSF Gal_kin_glcsltr 1 978 IPR012369 -
Pvu1g0801 996 SUPERFAMILY GHMP Kinase, C-terminal domain 716 966 IPR036554 -
Pvu1g0801 996 PANTHER L-ARABINOKINASE 17 973 - -
Pvu1g0801 996 Pfam GHMP kinases N terminal domain 626 691 IPR006204 GO:0005524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0801 K12446 - gmx:100787860 1753.41