Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0797 ATGGCTGTTTTTCTTCCTGCCACAAGAGAGTCAATTATTCAGGCACTGCGAGCCTACCACCCATATGATACCATATCCTCTTTTTATCAGATACTTGAGGATCCTTCTTTTGCCCCGTATGCTTTGAGCATGAAAATGCTAGCCATCAAAAACCTCATTGAGGAGTTCATGGAAAGGAAAATGCCAGAGGATCTGTTCCACCTTTTGACTCGGTTGAGGCCTTTCTTTTCCTCGGTTCCAAACGTAAAAACGGCAAAGATTGTGTGGGACGTAATTGATTCTCTTGGTAAAATGCCAGGGACTTCTGATCTACAAATTGAACTCTGCAGAGAAACGGTGCAATGGGCTCGTGCTGAAAGGCGTACCTTTCTGAGGCGGCGACTTGAGGCAAGACTTGCTGCACTACTTCTGGAAGATAAGGAGTACTTGGAAGCTTTGACTCTCCTCAATGGCCTGGTCAAGGAGGTTAGAAGACTAGATGACAAGCTTCTACTTGTAGAGATACACTTGCTTGAAAGCAAGCTACACTCTTCCTTAAGAGACCTTCAAAAGGCAAAGGCCGCCCTATTAGCTGCAAAAACAGCTGCAAATGCTGTTTACCTTCCTCCAGCTCAACAAGCTGCCATGGATTTTCAGAGTGGGATTCTTCTTCTCGAGGAGAAGGAATACAGAATTGCAGATAGTTATTTCTTTGAAGCTTTTGAGTCTTTCACTGATCTTGAGGACCCTAAGGGGGTCCTTAGCCTGAAATACAATCTGTTGTGTATGATAATTCTGGATGAAGCTGATAATGTGGCCGATATAATATCTAATGATGTTGACTACCACAATCGTGGACCCGACTTGGACGCCATGGAAGCCTTAGCAAATGCTCGTAACATGCGATCTCTGAATTTATTCGAAATCGCTTTGCGAGATTATAAGGCTCAGTTGGAGGGAGATCCAATTGTCCACAGACACCTTTCATCCCTGTATGACACTCTTCTGGAAGACAACCTTTGCAGATTGGTTGAACCTTTCTCAAGGGTTGAGATTGCACACATTTCTGAACTAATTAAACTTCCTGTTGATCATGTGGAGCAAAAGTTGTGTCGGATGATTTTGGACAAGAAGTTCACCGGGATAATGGATCAAGGAGCTGGATGCCTTGTCATATTTGATGATCCCGAACTGCATCCTATATACCCTGAAACCTTAGTAACCATTCTTGACGCTGGGAAAGTCGTGGACAGTCTTTATGCTAGGTATGCCAAGTTAATTTCATGA 1266 0.4368 MAVFLPATRESIIQALRAYHPYDTISSFYQILEDPSFAPYALSMKMLAIKNLIEEFMERKMPEDLFHLLTRLRPFFSSVPNVKTAKIVWDVIDSLGKMPGTSDLQIELCRETVQWARAERRTFLRRRLEARLAALLLEDKEYLEALTLLNGLVKEVRRLDDKLLLVEIHLLESKLHSSLRDLQKAKAALLAAKTAANAVYLPPAQQAAMDFQSGILLLEEKEYRIADSYFFEAFESFTDLEDPKGVLSLKYNLLCMIILDEADNVADIISNDVDYHNRGPDLDAMEALANARNMRSLNLFEIALRDYKAQLEGDPIVHRHLSSLYDTLLEDNLCRLVEPFSRVEIAHISELIKLPVDHVEQKLCRMILDKKFTGIMDQGAGCLVIFDDPELHPIYPETLVTILDAGKVVDSLYARYAKLIS* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0797 421 Pfam 26S proteasome regulatory subunit RPN6 N-terminal domain 20 128 IPR040773 -
Pvu1g0797 421 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 319 402 - -
Pvu1g0797 421 ProSiteProfiles PCI domain profile. 210 390 IPR000717 -
Pvu1g0797 421 SUPERFAMILY "Winged helix" DNA-binding domain 313 393 IPR036390 -
Pvu1g0797 421 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2 3 420 - -
Pvu1g0797 421 PANTHER BNAA09G54190D PROTEIN 3 420 - -
Pvu1g0797 421 SMART PINT_4 319 402 IPR000717 -
Pvu1g0797 421 Pfam PCI domain 284 385 IPR000717 -
Pvu1g0797 421 Gene3D - 47 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0797 Pvu-Chr1 11384977 11391443 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0797 K03036 - gmx:100777365 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1066 9 15683622 15686545 Pvu1g0797 1 11384977 11391443 PCT