Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0793 ATGAGCAGCATGCACATAGAAACCCCAGAAACTTTGGCTGATGGCAACAAAAACTTCGATGAAGATGGACGAGCTAAAAGAACAGGGACATGGATAACTGCAAGTGCTCATATCATAACGGCGGTGATTGGTTCTGGAGTTCTATCTCTTGCATGGGCAATTGCGCAGATGGGTTGGGTGGCTGGTCCAGCAGTGCTTTTTGCCTTCTCTTTTATCACATACTTCACTTCCACTCTTCTCGCTGATTCTTACCGTTCACCTGACCCTGTTCATGGCAAGCGAAACTACACATATTCTGAGGTTGTCAAAGCTAACTTAGGAGGAAGAAAATTCCAGCTTTGTGGATTGGCTCAGTATATAAATCTTGTTGGTGTAACCATCGGCTACACTATAACTGCATCAATCAGTATGGTGGCGGTGAAGAGGTCGAACTGTTTTCACAAGCATGGACATGAAGCCAAGTGCAACATAAATAACTACCCTTACATGATCGTTTTTGCCTGCATTCAAATTGTTCTTAGCCAAATACCAAACTTCCATAAGCTCTCTTGGCTCTCTATTGTTGCAGCTGTGATGTCTTTCGCTTATTCTTCCATTGGTCTTGGACTCTCCCTAGCCAAAGTCATAGGTGGGGCACACGCGCGGACATCAATAACAGGGGTGCAAGTGGGGGTGGACGTTACGGGAACGGAAAAGGTTTGGAGGATGTTTCAAGCTATCGGTGACATTGCCTTCGCTTATGCTTTTTCAAATGTGCTCATTGAGATCCAGGACACTCTAAAATCAGGCCCACCAGAGAACAGAATGATGAAGAGAGCAAGTTTAATTGGGATAATGACAACGACATTATTTTATGTGCTATGTGGGTGCTTAGGCTATGCCGCGTTTGGAAATGACGCACCTGGAAATTTCCTCACAGGGTTCGGCTTCTATGAGCCCTTTTGGCTAATAGACTTTGCCAATATCTGCATAGCAGTGCATTTAGTTGGGGCATACCAGGTGTTTGTGCAACCTATATTTGGGTTCGTGGAGAAATGGAGCAAAGAAAAATGGCCAGAAAGCCAATTTATAAATGGTGAGCATGGTGTGAATGTTCCTCTGTGTGAAGGCATAACCCTGAATTTCTTTAGGATGTTTTGGAGGACAACGTATGTGATCATCACTGCTGTTCTAGCCATGCTATTTCCCTTCTTCAATGACTTTCTGGGGCTCATTGGTTCACTCTCATTCTGGCCATTGACGGTCTACTTCCCTGTAGAGATGTACATTAAGCGATCCAACATGAAAAGCTTTTCCTTCACATGGATTTGGCTCAAGATTCTGAGTTGGGTCTGCTTAATCATTTCTATTATCTCAGCTGTGGGTTCCATCCAAGGCCTTGCTCATGATCTCAAGAAATACAAGCCTTTCCAAGCACAGCAATAG 1425 0.4421 MSSMHIETPETLADGNKNFDEDGRAKRTGTWITASAHIITAVIGSGVLSLAWAIAQMGWVAGPAVLFAFSFITYFTSTLLADSYRSPDPVHGKRNYTYSEVVKANLGGRKFQLCGLAQYINLVGVTIGYTITASISMVAVKRSNCFHKHGHEAKCNINNYPYMIVFACIQIVLSQIPNFHKLSWLSIVAAVMSFAYSSIGLGLSLAKVIGGAHARTSITGVQVGVDVTGTEKVWRMFQAIGDIAFAYAFSNVLIEIQDTLKSGPPENRMMKRASLIGIMTTTLFYVLCGCLGYAAFGNDAPGNFLTGFGFYEPFWLIDFANICIAVHLVGAYQVFVQPIFGFVEKWSKEKWPESQFINGEHGVNVPLCEGITLNFFRMFWRTTYVIITAVLAMLFPFFNDFLGLIGSLSFWPLTVYFPVEMYIKRSNMKSFSFTWIWLKILSWVCLIISIISAVGSIQGLAHDLKKYKPFQAQQ* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0793 474 Pfam Transmembrane amino acid transporter protein 27 459 IPR013057 -
Pvu1g0793 474 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 6 467 - -
Pvu1g0793 474 PANTHER OS05G0424000 PROTEIN-RELATED 6 467 - -
Pvu1g0793 474 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0793 Pvu-Chr1 11229476 11234860 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0793 3 472 Organic Solute Cotransporters AT5G49630 73.895 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0793 K24917 - gmx:100782534 841.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0793 1 11229476 11234860 Pvu1g0793 1 11229476 11234860 ECH
Pvu9g1150 9 16788827 16792372 Pvu1g0793 1 11229476 11234860 PCT