Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0787 ATGTCGAACGCTTTGTCGTTCACGCTACCCGCTCTAAACAACCCTCAAATAAGCGCTTTCAACAGCCCTAACAAAGCGCGTCTGCATCTGAGAAGTAGGGTTGCACGATGCCCCGCCTCGACCGTAGAGAAGAAAAGACTGTTCGGCGCACAGGTGCGGTCGAGCGGGTTTGACCGGATCCGGTTGCTGCAATCGGGGCGGTTGCCAAAATGGAGGGTGGCGGTCCGGTCAGCATTCTCTGCCGTGCCGGAGAAGCCGCTGGGGCTGTATGATCCGGCGATGGACAAGGACTCGTGCGGGGTGGGGTTCGTGGCGGAGTTGTCGGGAGAGTGTAACCGCAGAACGGTAACCGACGCGCTGGAAATGTTGGTGAGGATGACGCACAGAGGTGCTTGCGGATGCGAAGCCAACACTGGAGATGGTGCCGGAATTCTTGTTGCTCTGCCTCATGTCTTTTACCAGGAGGTTGTGGATTTTGAGCTTCCTCCCCAAGGAAAATATGCAGTTGGCATGTTTTTCTTGCCAAAGTCTGAAAACCGAAGGAAGGAAAGCAAAAAATTATTTAGCAAGGTTGCTGAATCTCTGGGGCACACTGTTCTTGGTTGGCGGTCTGTACCAACTGATAACACAGGATTGGGCAAATCGGCCCTACAGACTGAACCAGTGATTGAACAGGTGTTTCTTACACCAAGTGCTGAATCAAAAGTTGATTTGGAAAGACAGATGTACATATTAAGGAAGCTCAGCATGGCAGCTATTACATCTGCATTAAACCTCCAAAATGATGGCATTACTGATTTCTATATCTGTTCACTTTCATCAAGGACTGTTGTTTACAAAGGTCAGCTAACACCAGCTCAGTTGAGGGATTATTATTTTGCTGATCTTGGCAATGAAAGGTTTACGAGCTACATGGCCCTGATACATTCACGGTTTTCTACAAATACTTTTCCTAGCTGGGATCGTGCTCAACCTATGCGTGTATTAGGACACAATGGGGAAATCAACACACTCAGAGGCAATGTTAACTGGATGAAGGCACGTGAGGGTTTACTAAAATGCAAGGAGCTTGGTTTATCAGAGAATAAATTAAAGAAGCTTTTGCCCATTGTGGATGCAAATTCATCCGATTCAGGAGCTTTTGATGGTGTGCTTGAGTTTTTGCTTCATTCAGGAAAAAGTCTCCCTGAAGCTGTTATGATGATGATTCCTGAAGCATGGCAAAATGACAAGAACATGGATTCTCAGCGTAAAGCATTTTATGAATACTTCTCAGCCCTCATGGAGCCATGGGATGGGCCAGCTCTTATATCATTTACCGATGGTCACTATCTTGGAGCTACATTGGATAGGAATGGACTGCGACCAGGCCGTTTCTATGTCACCCATAGTGGACGAGTTATAATGGCAAGTGAAGTGGGGGTTGTTGACATTCCACCAGAAGATATATGTAGGAAAGGTAGACTAAATCCTGGCATGATGCTTCTGGTTGATTTTGAAAAGCATGCAGTTGTAAATGATGATGCCTTAAAAGAGCAGTACTCATTGGCAAGACCATATGAGGATTGGCTCAAAAATCAGAAAATTGAACTCAAAGACATTGTTGATTCTGTTCCTAAATCTGGGAGAGTACCACCACCTATAGCAGGAGTGGCTCCACCGTCCAATGATGACGAAGATATGGTAAATATGGGCATTCATGGCTTACTGGCTCCATTGAAAGCTTTTGGATATTCAGTTGAATCTTTGGAAATGCTGTTGCTTCCTATGGCCAAGGATGGTGTAGAAGCCCTTGGGTCAATGGGAAATGATACACCGCTAGCTGTCATGTCTAATAGAGAGAAACTTACTTTTGAATATTTCAAGCAAATGTTTGCTCAAGTGACAAACCCTCCTATTGATCCTATTAGAGAGAAAATAGTCACTTCTATGCAATGCATGGTTGGTCCAGAAGGCGATCTGACTGAAATCACGGAAGAGCAATGCCACCGCCTTTCCCTCAAAGGTCCCCTTTTATACACTGAAGAAATGGAAGCCATTAAAAAAATGAATTATAGGGGATGGCACAGCAAAGTTATAGACATAACGTACTCAAAGGAACGTGGTAAGGGAGGGTTGGAAGAAGCATTGGACAGGATATGTGCAGAAGCACATGATGCAATTAGTGAAGGCTATACCACTCTTGTGCTGTCAGATAGAGCCTTCTCAAGGAAACGAGTTGCCGTGAGCTCCCTCCTAGCTGTTGGTGCTGTCCATCAACATCTAGTTAAAACACTTGAGCGCACTAGAGTTGCCTTAATAGTTGAATCTGCTGAGCCCCGTGAAGTGCACCATTTCTGTACACTTGTTGGTTTTGGTGCTGATGCTATATGCCCATATTTGGCTATAGAGACAATTTGGCGACTGCAGGTTGATGGAAAGATCCCACCTAAATCAAGTGGTGAATTCCACTCAAAAGAAGAGTTGGTCAAGAAGTATTTCAAAGCAAGCAACTATGGAATGATGAAGGTTCTTGCCAAGATGGGAATATCAACTTTGGCATCATACAAAGGTGCTCAGATTTTTGAAGCTCTAGGTCTTTCATCTAAAGTGATTGAAAAGTGCTTTGCTGGGACTCCAAGTCGAGTTGAGGGTGCAACATTCGAGACACTCGCTCGTGATGCTTTTCAACTGCATGAGTTGGCTTTTCCTTCCCGTGTTTTCTCTCCTGGAAGTGCAGAAGCTGTAACGTTGCCAAATCCTGGTGATTATCACTGGAGAAAAGGTGGTGAAGTTCACCTGAATGATCCTCTTGCTATAGCAAAGCTCCAAGAGGCTGCCAGAACTAACAGTGTAGATTCATATAAACAGTATGCTAAGTTCATTCATGAATTGAACAAGGCTTGTAATTTGCGGGGACTACTGAAATTTAAAGAGACAGCTGTTAAAATTCCTATTGATGAAGTGGAGCCTGCTAGCGAAATAGTAAAACGGTTTTGCACCGGGGCCATGAGTTATGGGTCAATATCATTGGAGGCACACACAGCATTAGCAATGGCTATGAATAAAATTGGAGGGAAATCCAACACAGGTGAGGGAGGGGAGCAACCATCTCGTATGGAGCCTCTTCCTAATGGCACAATGAATCCCAAAAGGAGTGCCATTAAGCAAGTGGCTAGTGGGAGATTTGGAGTTTCAAGTTACTACCTTACAAATGCTGATGAACTACAGATAAAAATGGCCCAGGGAGCAAAACCTGGTGAGGGAGGCGAACTTCCTGGCCACAAGGTTATAGGAGACATTGCTGTTACTAGGAATTCAACTGCAGGGGTAGGACTTATCAGTCCACCTCCCCATCATGATATTTATTCAATTGAAGACCTTGCCCAACTAATTCATGATCTGAAGAATGCCAACCCAACTGCTCGGATTAGTGTGAAATTGGTCTCTGAAGCTGGAGTGGGGATTATTGCTAGCGGAGTTGTTAAAGGCCATGCCGACCATGTGTTGATCTCAGGTCATGATGGAGGTACTGGGGCATCCAGATGGACTGGCATAAAGAATGCTGGGCTTCCTTGGGAACTTGGCCTGGCTGAGACCCACCAGACTTTGGTTGCTAATGATCTACGCGGTCGCACAGTCCTCCAAACTGACGGGCAACTGAAAACTGGGAGAGATGTGGCAATAGCTACTCTGCTTGGTGCAGAAGAGTTTGGTTTCAGTACTGCTCCACTCATCACTCTTGGCTGCATCATGATGCGGAAGTGCCACAAGAACACCTGTCCCGTTGGCATTGCTACTCAAGATCCCGTACTCAGAGAAAAGTTTGCTGGAGAACCCGAGCATGTTATCAACTTCTTTTTTATGGTGGCAGAAGAAATGAGAGAAATTATGTCCCAGCTTGGGTTTAGGACAGTTAATGAGATGGTTGGTCGATCTGATATGCTTGAAGTTGATAAGGAAGTCATTAAGAGCAACGAGAAACTAGAAAACATTGATCTCTCTCTATTGCTTAGACCTGCAGCTGAATTGCGGCCGGAAGCTGCTCAATATTGTGTGCAAAAACAGGATCATGGTTTGGAAAATGCCTTGGATAACAAGCTCATAAGTCTATCTAATGCTGCTTTGGAAAAGGGTCTCCCTGTATACATTGAGACTCCAATCTATAATGTAAACCGTGCAGTGGGAACTATGCTTAGCCATGAGGTGACTAAACGGTACCACCTAGCTGGTCTTCCAAGCGACACCATTCATATCAGATTTACTGGCAGTGCAGGCCAGAGCTTTGGTGCATTCCTCTGTCCTGGTATCACTTTGGAACTTGAAGGTGATAGTAATGACTACGTTGGTAAAGGATTATCCGGTGGCAAGATTGTAGTGTATCCTCCAAAAGGAAGTAATTTTGACCCTAAGGAGAACATTGTGATTGGTAATGTGGCTCTGTATGGGGCCACTCAAGGGGAAGCTTACTTCAACGGGATGGCAGCCGAAAGATTTTGTGTCCGTAATTCTGGGGCTAAGGCTGTTGTGGAAGGTGTTGGTGATCATGGGTGTGAGTACATGACTGGTGGGACTGTTGTTGTGCTTGGGGAAACTGGTAGAAATTTTGCTGCAGGTATGAGTGGCGGGATTGCTTATGTTCTTGATTTGGATGGAAAATTCCAATCTCGATGCAACTTGGAACTAGTAGATCTGGACAAGGTTGAAGAGGAAGAGGATGTTTATACACTTAGAATGTTGATACAGCAGCATCAGCGTCACACAAATAGTCTGCTTGCCAACGAAGTGCTTGATGATTTTGAGAATCTTCTTCCTAAATTTATCAAGGTGTTCCCTCGGGAGTATAAACGTGTTCTAGCCAGTGTGAAGTCTGAGGAGGCCTCCAAAGATGCAGTGGTGCAGGCAGCAAAAGACGCAGAAGATCAAGATGATGAAGCACAAGCAGTAGAGAAGGATGCTTTTGAAGAACTTAAGAAACTGGCAACTGTATCTTTGAATGAGAAACAGAGTCAGGAAAATTCTGGATGTCCTCTTGGAAATAAAATACCAGAATTTAATGAGCTAGTATACCAAAATAGGTGGAGGGAAGCATTAGAGAGGCTTCTTGAAACAAATAACTTTCCCGAATTTACTGGTCGGGTATGCCCAGCACCTTGTGAAGGTTCTTGTGTCCTTGGTATTATTGAGAACCCCGTATCCATTAAAAGCATTGAATGTGCCATAATAGACAAGGCTTTTGAGGAGGGTTGGATGGTGCCACGACCTCCAGTCAAGAGAACTGGGAAAAGAGTAGCCATCGTTGGAAGTGGACCATCTGGTTTGGCAGCTGCTGATCAGCTAAATAAAATGGGTCATGCGGTAACAGTGTATGAAAGAGCTGATAGGATTGGAGGGCTTATGATGTATGGGGTCCCCAACATGAAATCTGACAAAGTGGATGTAGTTCAACGACGAGTGAATCTTATGGCGGAGGAGGGAGTAGATTTTGTGGTGAATGCTAATGTTGGAAATGATCCTTTATACTCTCTTGATCGGCTTCGGGAGGAAAACGATGCCATTGTCTTGGCTGTAGGATCTACAAAACCTAGGGATCTTCCTGTACCTGGTCGGGAGCTGTCAGGAGTCCATTTTGCCATGGAGTTTCTCCATGCAAATACTAAAAGCTTGCTTGATAGTAATCTTGAGGATGGTAGCTACATTTCAGCCAAGGGCAAGAAAGTTGTTGTCATTGGTGGAGGTGACACTGGCACAGATTGCATAGGAACATCCATTCGTCATGGTTGTAGTAGCATTGTAAATCTTGAACTCCTTCCTCAGCCCCCACCAACTAGGGCTCCCGGCAACCCGTGGCCTCAGTGGCCTCGCATATTCCGAGTAGATTACGGTCACCAAGAGGCTGCAGCCAAATTTGGTAAAGATCCAAGATCGTACGAGGTTCTGACTAAGAGGTTTTTGGGAGATGAAAATGGAGTTTTGAAAGGACTTGAAGTGATTCGTGTTTGCTGGGAGAAGGATGAAACCGGCAGGTTTCAGTTTAAGGAAATTGAGGGTTCGGAGGAGATTATTGAGGCTGACCTAGTTTTACTAGCCATGGGGTTCCTTGGTCCCGAGCCTACAATTGCAGAGAAGTTGGGTTTGGATCGAGACAACAGGTCAAACTTCAAGGCTGATTATGGCCGCTTCTCAACCAATGTCAAAGGGGTGTTTGCAGCAGGTGATTGTCGCCGGGGTCAGTCCCTGGTGGTGTGGGCCATTTCAGAGGGACGACAAGCTGCGGCACAGGTGGACAACTACCTCGTCAAAGACGATGATGAGCTCAGGAATCAGGATGGGCTTGTCAAGAGGCAGCAGGGGCTCAACAAGAAGCAGCAGGGCAGCAGCAAACACACGGTGATGACTTAG 6381 0.4553 MSNALSFTLPALNNPQISAFNSPNKARLHLRSRVARCPASTVEKKRLFGAQVRSSGFDRIRLLQSGRLPKWRVAVRSAFSAVPEKPLGLYDPAMDKDSCGVGFVAELSGECNRRTVTDALEMLVRMTHRGACGCEANTGDGAGILVALPHVFYQEVVDFELPPQGKYAVGMFFLPKSENRRKESKKLFSKVAESLGHTVLGWRSVPTDNTGLGKSALQTEPVIEQVFLTPSAESKVDLERQMYILRKLSMAAITSALNLQNDGITDFYICSLSSRTVVYKGQLTPAQLRDYYFADLGNERFTSYMALIHSRFSTNTFPSWDRAQPMRVLGHNGEINTLRGNVNWMKAREGLLKCKELGLSENKLKKLLPIVDANSSDSGAFDGVLEFLLHSGKSLPEAVMMMIPEAWQNDKNMDSQRKAFYEYFSALMEPWDGPALISFTDGHYLGATLDRNGLRPGRFYVTHSGRVIMASEVGVVDIPPEDICRKGRLNPGMMLLVDFEKHAVVNDDALKEQYSLARPYEDWLKNQKIELKDIVDSVPKSGRVPPPIAGVAPPSNDDEDMVNMGIHGLLAPLKAFGYSVESLEMLLLPMAKDGVEALGSMGNDTPLAVMSNREKLTFEYFKQMFAQVTNPPIDPIREKIVTSMQCMVGPEGDLTEITEEQCHRLSLKGPLLYTEEMEAIKKMNYRGWHSKVIDITYSKERGKGGLEEALDRICAEAHDAISEGYTTLVLSDRAFSRKRVAVSSLLAVGAVHQHLVKTLERTRVALIVESAEPREVHHFCTLVGFGADAICPYLAIETIWRLQVDGKIPPKSSGEFHSKEELVKKYFKASNYGMMKVLAKMGISTLASYKGAQIFEALGLSSKVIEKCFAGTPSRVEGATFETLARDAFQLHELAFPSRVFSPGSAEAVTLPNPGDYHWRKGGEVHLNDPLAIAKLQEAARTNSVDSYKQYAKFIHELNKACNLRGLLKFKETAVKIPIDEVEPASEIVKRFCTGAMSYGSISLEAHTALAMAMNKIGGKSNTGEGGEQPSRMEPLPNGTMNPKRSAIKQVASGRFGVSSYYLTNADELQIKMAQGAKPGEGGELPGHKVIGDIAVTRNSTAGVGLISPPPHHDIYSIEDLAQLIHDLKNANPTARISVKLVSEAGVGIIASGVVKGHADHVLISGHDGGTGASRWTGIKNAGLPWELGLAETHQTLVANDLRGRTVLQTDGQLKTGRDVAIATLLGAEEFGFSTAPLITLGCIMMRKCHKNTCPVGIATQDPVLREKFAGEPEHVINFFFMVAEEMREIMSQLGFRTVNEMVGRSDMLEVDKEVIKSNEKLENIDLSLLLRPAAELRPEAAQYCVQKQDHGLENALDNKLISLSNAALEKGLPVYIETPIYNVNRAVGTMLSHEVTKRYHLAGLPSDTIHIRFTGSAGQSFGAFLCPGITLELEGDSNDYVGKGLSGGKIVVYPPKGSNFDPKENIVIGNVALYGATQGEAYFNGMAAERFCVRNSGAKAVVEGVGDHGCEYMTGGTVVVLGETGRNFAAGMSGGIAYVLDLDGKFQSRCNLELVDLDKVEEEEDVYTLRMLIQQHQRHTNSLLANEVLDDFENLLPKFIKVFPREYKRVLASVKSEEASKDAVVQAAKDAEDQDDEAQAVEKDAFEELKKLATVSLNEKQSQENSGCPLGNKIPEFNELVYQNRWREALERLLETNNFPEFTGRVCPAPCEGSCVLGIIENPVSIKSIECAIIDKAFEEGWMVPRPPVKRTGKRVAIVGSGPSGLAAADQLNKMGHAVTVYERADRIGGLMMYGVPNMKSDKVDVVQRRVNLMAEEGVDFVVNANVGNDPLYSLDRLREENDAIVLAVGSTKPRDLPVPGRELSGVHFAMEFLHANTKSLLDSNLEDGSYISAKGKKVVVIGGGDTGTDCIGTSIRHGCSSIVNLELLPQPPPTRAPGNPWPQWPRIFRVDYGHQEAAAKFGKDPRSYEVLTKRFLGDENGVLKGLEVIRVCWEKDETGRFQFKEIEGSEEIIEADLVLLAMGFLGPEPTIAEKLGLDRDNRSNFKADYGRFSTNVKGVFAAGDCRRGQSLVVWAISEGRQAAAQVDNYLVKDDDELRNQDGLVKRQQGLNKKQQGSSKHTVMT* 2127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0787 2126 SUPERFAMILY FAD/NAD(P)-binding domain 1752 2092 IPR036188 -
Pvu1g0787 2126 TIGRFAM GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 1664 2094 IPR006005 GO:0006537|GO:0016639
Pvu1g0787 2126 Pfam Glutamine amidotransferases class-II 99 523 IPR017932 -
Pvu1g0787 2126 Pfam Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 1660 1742 IPR028261 -
Pvu1g0787 2126 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 99 525 IPR029055 -
Pvu1g0787 2126 Pfam GXGXG motif 1380 1566 IPR002489 GO:0016491
Pvu1g0787 2126 Pfam Glutamate synthase central domain 573 861 IPR006982 GO:0006807|GO:0015930
Pvu1g0787 2126 Pfam Conserved region in glutamate synthase 928 1297 IPR002932 GO:0006537|GO:0015930|GO:0016638
Pvu1g0787 2126 SUPERFAMILY Alpha subunit of glutamate synthase, C-terminal domain 1349 1612 IPR036485 GO:0016491
Pvu1g0787 2126 PRINTS Adrenodoxin reductase family signature 1756 1778 - -
Pvu1g0787 2126 PRINTS Adrenodoxin reductase family signature 1779 1792 - -
Pvu1g0787 2126 PRINTS Adrenodoxin reductase family signature 1822 1832 - -
Pvu1g0787 2126 PRINTS Adrenodoxin reductase family signature 1900 1914 - -
Pvu1g0787 2126 PIRSF GOGAT 1661 2118 IPR012220 GO:0005506|GO:0006537|GO:0010181|GO:0016040|GO:0050660
Pvu1g0787 2126 PIRSF GOGAT 16 1667 IPR012220 GO:0005506|GO:0006537|GO:0010181|GO:0016040|GO:0050660
Pvu1g0787 2126 PANTHER FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE 1662 2098 - -
Pvu1g0787 2126 PANTHER FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE 78 1624 - -
Pvu1g0787 2126 SUPERFAMILY FMN-linked oxidoreductases 568 1331 - -
Pvu1g0787 2126 Coils Coil 1625 1645 - -
Pvu1g0787 2126 Gene3D - 1754 1863 - -
Pvu1g0787 2126 Pfam Pyridine nucleotide-disulphide oxidoreductase 1755 2081 IPR023753 GO:0016491
Pvu1g0787 2126 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 99 500 IPR017932 -
Pvu1g0787 2126 Gene3D Aldolase class I 919 1336 IPR013785 -
Pvu1g0787 2126 CDD GltS 99 518 - -
Pvu1g0787 2126 MobiDBLite consensus disorder prediction 1020 1040 - -
Pvu1g0787 2126 CDD gltB_C 1357 1606 IPR002489 GO:0016491
Pvu1g0787 2126 MobiDBLite consensus disorder prediction 2106 2126 - -
Pvu1g0787 2126 Gene3D Aldolase class I 551 917 IPR013785 -
Pvu1g0787 2126 Gene3D - 1864 2025 IPR036188 -
Pvu1g0787 2126 SUPERFAMILY alpha-helical ferredoxin 1668 1764 - -
Pvu1g0787 2126 PANTHER GLUTAMATE SYNTHASE 1 [NADH], CHLOROPLASTIC 1662 2098 - -
Pvu1g0787 2126 PANTHER GLUTAMATE SYNTHASE 1 [NADH], CHLOROPLASTIC 78 1624 - -
Pvu1g0787 2126 CDD GltS_FMN 930 1309 IPR002932 GO:0006537|GO:0015930|GO:0016638
Pvu1g0787 2126 Gene3D - 1611 1753 IPR009051 GO:0051536
Pvu1g0787 2126 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 99 535 IPR029055 -
Pvu1g0787 2126 Gene3D - 1338 1610 IPR036485 GO:0016491
Pvu1g0787 2126 MobiDBLite consensus disorder prediction 2104 2126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0787 Pvu-Chr1 10937742 10949631 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0787 K00264 - gmx:100809905 3823.48