Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0768 ATGGAGAGTGATCCTGTGAAACTGAAAGTTCACCTGGTCACTGGCACGGACACGGCCGAGTTCAGGCTGCTCAGTGAGGCGTTGGGTCGGAGCTCAGTGGTGGGCCTGGACGCGGAGTGGAAGCCGGTACGGAAGTCATTCCCGACGGTGTCGGTGCTCCAAATCGCGTGCGGTGACTGGGGCGTGTTTGTGTTGGACTTGTTGTCCCTTCCTCTCTCTTCACTGTCGGAACCGCTGCGAGAATTGCTGCTGTGCCCCGACATCTTGAAACTCGGATTCGGATTCAAGCAGGATTTGGTTTACCTGTCCTCCACTTTCTGCTCCCACGGCGGTTTCGACAAGGTTGAGCCGTATTTGGATATCAGGAGTGTGTACAATCATCTGCAGCATAGTAAGAAGCATGCACCCAAGCAAAGTAAGAGTTTGTCAACAATTTGTGCAGAAGTATTGGGGTTTTCGCTCTCCAAGGAACTTCAATGTAGTGATTGGTCGCATCGTCCTCTTACAGAAGAGCAGATAAGATATGCAGCTCTGGATGCTCATTGCTTGCTCGACATATTTAAGGTCTTCCAGGAAATGGTTGTCAAAAAAGGGGACTTGATTCTTGAGACTACGGTATTGTCTAATCCTGATGCTAATCTTGGGTTAAAAGAGGTATTCAGAAATCATGATTCGAGTGATAAAGTTCTAAGAGCACATTTTTCTGAAGCTTTAGCAATTGTCGAAGCCACAACTTGTTCCGATGTTGCTCGTATGATACCTTTAGCTGGGGGAATGATCCAAAAGTCATCATATTGGGTTACTATGCCAATGGATGAAGTTTTGTTGAAAGTTGTAAAAAAATATGGTGATAGAATCCTGCTAAAGGAGTCAGACAAAAAGCCCAAAAGCTCAAAAAAGAAAGGGAAGAAGCATTCACTAATTAATAGGATTAGCAAAGAAAATCATTTTGAGAACTTTGATGAGTGGCAAGGTACCCCACCCTGGGATCCTTTGGAGGGGGGGAATGGATATCCAAAGTTCCTTTGCGATGTAATGGTTGAAGGCTTGGCAAAACATTTACGATGCGTTGGGATAGATGCTGCAATTCCTTATTCAAAGAAGCCCGAACCAAGGATGTTGATAGAGCAAGCACAAAAAGAGAAACGAGTGATTTTGACACGGGATGCAAAGTTGCAAAGACATGACTATCTGATGAAAAACCAAATATATAGAGTGAAGAGTCTTCTGAAAAATGAACAGCTACTTGAGGTTATTGAAACTTTTCAACTTAAAATTAACGAGGACAAGCTAATGTCGAGGTGCACAAAATGCAATGGAACTTTTATTCAGAAGCCACTGACAACTGAAGAAGCTATTGAAGCTGCGAAGGGTTTTCAAAGAATTCCAAATTGCTTATTTAACAAGAATTTAGTGTTTTGGCAGTGCATGGACTGTCACCAACTTTATTGGGAGGGAACCCAATACCATAATGCAGTTCAGAAGTTCATTGACATTTGCAAGCTGAGTGACTAA 1515 0.435 MESDPVKLKVHLVTGTDTAEFRLLSEALGRSSVVGLDAEWKPVRKSFPTVSVLQIACGDWGVFVLDLLSLPLSSLSEPLRELLLCPDILKLGFGFKQDLVYLSSTFCSHGGFDKVEPYLDIRSVYNHLQHSKKHAPKQSKSLSTICAEVLGFSLSKELQCSDWSHRPLTEEQIRYAALDAHCLLDIFKVFQEMVVKKGDLILETTVLSNPDANLGLKEVFRNHDSSDKVLRAHFSEALAIVEATTCSDVARMIPLAGGMIQKSSYWVTMPMDEVLLKVVKKYGDRILLKESDKKPKSSKKKGKKHSLINRISKENHFENFDEWQGTPPWDPLEGGNGYPKFLCDVMVEGLAKHLRCVGIDAAIPYSKKPEPRMLIEQAQKEKRVILTRDAKLQRHDYLMKNQIYRVKSLLKNEQLLEVIETFQLKINEDKLMSRCTKCNGTFIQKPLTTEEAIEAAKGFQRIPNCLFNKNLVFWQCMDCHQLYWEGTQYHNAVQKFIDICKLSD* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0768 504 Pfam 3'-5' exonuclease 16 194 IPR002562 GO:0003676|GO:0006139|GO:0008408
Pvu1g0768 504 Pfam Mut7-C RNAse domain 339 495 IPR002782 -
Pvu1g0768 504 SMART 35exoneu6 12 195 IPR002562 GO:0003676|GO:0006139|GO:0008408
Pvu1g0768 504 PANTHER 3'-5' EXONUCLEASE DOMAIN-CONTAINING PROTEIN 8 501 - -
Pvu1g0768 504 SUPERFAMILY Ribonuclease H-like 16 198 IPR012337 -
Pvu1g0768 504 Gene3D - 4 200 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0768 Pvu-Chr1 10219479 10231145 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0768 K09122 - gmx:100782654 858.596