Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0767 ATGTCAAAGGCGGTGGTTTATATCCTAATAGCCACCGCCGTGTTGCTCTACAAATGCTTGTCCCCATTGAGCCTGGGCGCACCAAAGAGTCGCCTCAATCGCAGGTTCGGGTACAAGCTACTTGAACGGGCACCGAGTTTTGACCCTCTTGTGACAAATAATGGGAGAGAGGTTGTAAAGAAAACCATTCCCCAGGAACCTTCTCCTCGTACCTCCTCCAATTTGGACAGTACCACTGCGCCTGTTGATGTTGCAGGGACATACCAATATCTTACCTCTGGCGGAAAATTGAACACCACGTTAAGGTTGATCATCTTGTTCCCTTTGTTAGATAGAGAACCCAAAGATGGGGTGGTTGGTTTCGAAGAGTTAGAGGCTTGGATTACTCAACGAGCAACAGACAGATTAGATTATCTCACGCAAGCAGAGTTGGATTCCAAAGACGACAATGGGGATTTGGCCGTTTCTTTTAAGGAGTATTTACCTCAGTTTTCTCAAAAGCATATGGAGGAAAACAATATGCTACATGGCGAAGCAGGATGGTGGAACGAAAGATTTAACGTTGCAGACATTGATCACAACGGGCTTCTGAATTTCACCGAACTTAGAGATTTTTTGCATCCAGAAGATAGCCAAAATCAAGAAACGCAAAAGTGGATGTTGAGAGATAGACTAAAGCGCATGGACGATGAAAAAGATGGGAAAATGAACTTTGGTGAATTTGAAAACCATGTATACAATACATACGAAAGTTATATGACCTTTGAAACTAATGGAGGAATTGTACCTTCTCCAAAAGACAAATTTTTACAGCTTGATGTAAACAAAGATCAATTTTTGTCACCAGAAGAATTGTTACCAATTCTTTCTTATATCTACCCTGGCGAGATAGCTTATGCTAAATATTTCACATGCTATTTAATGAATGAGGCTGATGATAATGGAGATAGACAGTTGACACTTCAAGAGATGCTTGATCATGAAACTATTTTCTACAGTACAGTTCATGCAGATGGGCACCAAGAAAGCGACGATGATCATGATGAGCTTTGA 1053 0.4141 MSKAVVYILIATAVLLYKCLSPLSLGAPKSRLNRRFGYKLLERAPSFDPLVTNNGREVVKKTIPQEPSPRTSSNLDSTTAPVDVAGTYQYLTSGGKLNTTLRLIILFPLLDREPKDGVVGFEELEAWITQRATDRLDYLTQAELDSKDDNGDLAVSFKEYLPQFSQKHMEENNMLHGEAGWWNERFNVADIDHNGLLNFTELRDFLHPEDSQNQETQKWMLRDRLKRMDDEKDGKMNFGEFENHVYNTYESYMTFETNGGIVPSPKDKFLQLDVNKDQFLSPEELLPILSYIYPGEIAYAKYFTCYLMNEADDNGDRQLTLQEMLDHETIFYSTVHADGHQESDDDHDEL* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0767 350 SUPERFAMILY EF-hand 181 332 IPR011992 -
Pvu1g0767 350 ProSitePatterns EF-hand calcium-binding domain. 273 285 IPR018247 -
Pvu1g0767 350 ProSitePatterns EF-hand calcium-binding domain. 312 324 IPR018247 -
Pvu1g0767 350 PANTHER RETICULOCALBIN 1 350 - -
Pvu1g0767 350 ProSiteProfiles EF-hand calcium-binding domain profile. 177 212 IPR002048 GO:0005509
Pvu1g0767 350 PANTHER CALCIUM-BINDING EF HAND FAMILY PROTEIN 1 350 - -
Pvu1g0767 350 SMART efh_1 264 292 IPR002048 GO:0005509
Pvu1g0767 350 SMART efh_1 181 209 IPR002048 GO:0005509
Pvu1g0767 350 SMART efh_1 220 248 IPR002048 GO:0005509
Pvu1g0767 350 Gene3D - 97 254 - -
Pvu1g0767 350 SUPERFAMILY EF-hand 102 163 IPR011992 -
Pvu1g0767 350 ProSitePatterns EF-hand calcium-binding domain. 190 202 IPR018247 -
Pvu1g0767 350 Gene3D - 263 330 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0767 1 311 EF-hand Containing Proteins AT4G27790 38.318 2.61e-76 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0767 K23901 - gmx:100801332 561.607