Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0753 ATGAGGGGACTGTCCCCGAACTTTGTGGAGCCGCGCTACCGCTCCTCCTCCTCATTTAGTGAAGATACTAGCAAGAGAAGGTCTCAAAGAAGCAGAGATTTCAAAGATGTTGAGAAGGTGTTGCATACTCCGTTCCAAGAGAGGAGTATAACCTGCAGGCCAAATTGGAAATTAGTTTTGGTTATTGTTACATTGGGAACCTTGGTTACCATTTTCCATCCTCCAGCTGTTTATAATACCGATCATTTATCAAACTCTATTATATCGCGGCCAACTTTTATGAACAGCTGGAGAGGAGGATTTGGTGGCACTGATTCACGTTATGCATCATTTCTCAATATAGAGTGGAACCAAATATCTAATGTCCTTGAAAATTTGAAGGATAAGGACACATATCAGGGTGTTGGCTTATTAAACTTCAATGACAGTGAGAATGACCACTGGAAGGAGCTGATTCCAGATGCAGAGCATGTAGTCCTTTGGCTGGACTATGCTTCAAGTAATATTACTTGGGAATCTCTGTATCCTGAATGGATAGATGAAGAAGAAGAATATGAGTTCCCTACTTGTCCAACTCTACCTAGGATTCAGGTACCAGGAAAGCCCCGGCTTGATCTTATTGCTGCCAAGCTTCCCTGCCACAAATCAGGACGCTGGTCTAGAGATGTAGCTCGTTTGCACTTGCAAGTTGAAGCTGCAAGACTTGCTGCCTCTTCTAAAGGATATCATCCAGTGCGTGTGCTTTTGGTCACGGATTGCTTCCCCATTCCAAATTTATTTACTTGCAAGGACCTTATACAGCATGAAGGAAATGCCTGGCTTTATGAACCCAACCTGAATAGATTGAGAGATAAGCTGCAGCTACCAATTGGTTCATGTGAACTAGCAGTTCCTATGAATGCTAAAGAAAATTTTTATTCAGAAAGGCCACACCGAGAAGCTTATGCAACCATCCTGCACTCTGCGCACTTGTATGTTTGTGGAGCCATTACTGCTGCACAGAGTATTCGAATGGCTGGTTCAACACGAGATCTTGTGATTCTTGTTGACGAAACGATTAGTGACTATCATAGAGGGGGCTTGGAGGCTGCCGGGTGGAAGATTCATACAATCCAAAGAATCAGGAATCCGAAAGCAGAACCAGAGGCATACAACGAGTGGAACTACAGCAAATTCCGTCTCTGGCAGCTAACAGATTATGATAAAATAATTTTCATTGATGCTGACCTTCTTATTCTTAGAAATATCGATTTCCTTTTTGAGATGCCTGAAATTACTGCAATAGGAAACAATGCCTCGCTGTTCAACTCAGGTGTAATGGTGGTTGAACCATCAAATTGTACATTCCAACTGCTTATGGATCACATCAATGAGATTGTCTCCTACAACGGAGGGGACCAGGGGTATCTTAATGAAATCTTCACAAGGTGGCACCGGATTCCAAAACATATGAACTTCTTGAAGCACTTCTGGGAAGGTGATGAGGAAGAGAAAAAAGTGATGAAAACTCGTCTCTTCGCAGCCGATCCATCGATCCTTTATGTCATCCATTATCTGGGTAATAAACCATGGCTTTGCTTTCGAGACTATGACTGCAACTGGAATGTGGACATTCTGCAGGAGTTTGCAAGTGATGTGGCTCATGCAAGATGGTGGAAGGTGCATGATGCAATGCCAGAAAACTTGCATAAGTTCTGTTTGCTTAGGTCCAAGCAGAAGGCTGCATTAGAGTGGGATCGTAGACAAGCAGAAAAAGGAAACTACAGTGATGGTCACTGGAAAATCAAGATAGAAGATCCAAGACTGAAAACTTGCTTTGAGGATTTCTGTTTTTGGGAGAGCATGTTATGGCATTGGGGTGAAAAGAATTGGACAGATAATTCCACTGTTAACAATTCGCCACCTGTTGTCCAAACCAAATCTCTCTCTTCTTTATGA 1938 0.4267 MRGLSPNFVEPRYRSSSSFSEDTSKRRSQRSRDFKDVEKVLHTPFQERSITCRPNWKLVLVIVTLGTLVTIFHPPAVYNTDHLSNSIISRPTFMNSWRGGFGGTDSRYASFLNIEWNQISNVLENLKDKDTYQGVGLLNFNDSENDHWKELIPDAEHVVLWLDYASSNITWESLYPEWIDEEEEYEFPTCPTLPRIQVPGKPRLDLIAAKLPCHKSGRWSRDVARLHLQVEAARLAASSKGYHPVRVLLVTDCFPIPNLFTCKDLIQHEGNAWLYEPNLNRLRDKLQLPIGSCELAVPMNAKENFYSERPHREAYATILHSAHLYVCGAITAAQSIRMAGSTRDLVILVDETISDYHRGGLEAAGWKIHTIQRIRNPKAEPEAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFEMPEITAIGNNASLFNSGVMVVEPSNCTFQLLMDHINEIVSYNGGDQGYLNEIFTRWHRIPKHMNFLKHFWEGDEEEKKVMKTRLFAADPSILYVIHYLGNKPWLCFRDYDCNWNVDILQEFASDVAHARWWKVHDAMPENLHKFCLLRSKQKAALEWDRRQAEKGNYSDGHWKIKIEDPRLKTCFEDFCFWESMLWHWGEKNWTDNSTVNNSPPVVQTKSLSSL* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0753 645 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 311 561 IPR029044 -
Pvu1g0753 645 Pfam Glycosyl transferase family 8 320 525 IPR002495 GO:0016757
Pvu1g0753 645 MobiDBLite consensus disorder prediction 19 33 - -
Pvu1g0753 645 CDD GT8_Glycogenin 313 558 - -
Pvu1g0753 645 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 3-RELATED 14 626 IPR030519 GO:0005794|GO:0009834|GO:0015020|GO:0045492
Pvu1g0753 645 PANTHER GLYCOGENIN SUBFAMILY MEMBER 14 626 - -
Pvu1g0753 645 MobiDBLite consensus disorder prediction 1 33 - -
Pvu1g0753 645 SUPERFAMILY Nucleotide-diphospho-sugar transferases 313 564 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0753 Pvu-Chr1 9885382 9888871 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0753 9 621 Glycosyltransferase AT1G77130 69.516 0.0 866
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0753 K20890 - gmx:100787339 1221.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0753 1 9885382 9888871 Pvu1g0753 1 9885382 9888871 ECH