Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0745 ATGTCTTCCGCCTCCGGCTACGGCCGATCCTCCCAACGAGCCTCCGTCTCGCCGCTCCGCTCGCGGAAGTTGCCGGCGGGACCCGCCAAGCCCGCCGGAAGACCTACCACACCGTCCTCCTCCTCCACCTCGTCGAGGCCGTCGACCAAGGCCTCCATTTCTTCGGTGGCTACCGCCGCTGTGGCCGACGTGAGCAAGGCGAAGGAGAATGTCACTGTCACAGTCCGGTTCCGACCCCTCAGTGGGAGAGAAATTAATAAAGGGGACGAGGTGGCGTGGTATGCGGACGGGGATCATATAGTGAGGAATGAGTACAATCCTTCCATTGCTTATGGCTTTGATAAGGTATTTGGGCCTGCCACAACAACTCGGCATGTTTATGATGTGGCTGCTCAGCATGTTGTCAGTGGTACAATGGAAGGGATTAACGGTACTGTTTTTGCATATGGTGTTACTAGTAGTGGAAAGACTCATACTATGCATGGGGAGCAAAAATCACCAGGAGTTATCCCACTTGCAGTGAAGGATGTCTTCAGTATAATACAAGAGACTCCTGGACGGGAATTCTTATTACGTGTCTCGTATCTTGAGATTTACAATGAGGTCATTAATGACTTGCTGGATCCAACTGGGCAGAATCTAAGAATACGAGAGGATGCTCAGGGTACTTATGTTGAAGGAATCAAAGAGGAAGTTGTGCTATCTCCTGCTCATGCCCTTTCTTTAATTGCTACTGGAGAAGAGCATAGACACGTGGGTTCAAATAATTTCAATCTTGTTAGCAGTCGAAGCCACACTATTTTCACCTTGACTGTTGAAAGCAGTTCGCGAGGGGAAAATATAGGGGAAGAGGATGTGACATTGTCCCACCTGCACTTAATTGATCTTGCAGGTTCAGAAAGTTCTAAAACTGAAACAACTGGTTTGAGGAGAAAAGAAGGTTCTTATATAAATAAAAGCTTGCTTACTCTTGGAACGGTGATTGCTAAACTAACAGATGGAAAGGCAACTCATATTCCTTATCGAGATTCAAAGCTCACTCGATTGTTACAATCATCCCTTAGTGGCCATGGAAGGATTTCTCTCATTTGCACAGTTACTCCAGCTTCTAGCAGTAGTGAAGAGACACATAACACATTAAAATTTGCTCACCGGAGTAAGCATGTTGAAATCAAAGTTTCTCAAAATAAGATTTTGGATGAGAAGTCTCTGATCAAGAAATATCAGAGGGAAATTTCTGAGTTAAAGCAGGAGCTGCAGCATTTAAAGCGTGGCATGGTTGAGAATCCCAATATGGCGACCACATCTTCACAAGAAGATCTGGTTACTTTGAAGCTTCAGCTCGAAGCTGGCCAATCCAAATTGAAGTCAAGATTGGAAGAGGAGGAACAAGCTAAAGCAGCCTTGATGGGAAGAATTCAGCGTCTAACCAAATTAATCTTAGTTTCTACAAAGAATGCGATGTCATCAAGCATTCTAGAAAGGCCCAGCCATAGACGAAGGCATTCTTTTGCAGAAGATGAGCTAGCATATTTACCAGATAGAAAACGTGAGTCCTGGATTAATGATGATGCAGGGAGCCATGCTTCAGTTCCTTCACCAGAAGAAAAGGATGATGTTACCAATTTAGATGAATTGGGGAAGGATTACAAAAGAAGCAAACGGCGGGGAATGCTTGGGTGGTTGAAGTTAAGAAAACCTGATAATGTTGATGGATTATCACCAAATGTTGATAGTGAGGGGTCTGCAAATGGGTCACCTGCGTCTGCTTCAAAATTAACTCCAACTAGAGTTATGCTTTATGACATGAAAGACTCACGCAGGAATTCAGTCAGCAGAAAGGATAATGCCCCATCTATCAATTCTTTTACAGGAAGAACTCAAGCTGGTGATTTATTCAGTGTAACTGTTGGAGGCCGTCAACTTCCTCCGACTGGGACTACTGTTACAGATCAAATGGATCTACTGCGGGAACAAGTGAAAATGTTGGCTGGCGAGGTGGCATTCTGCATTAGTTCTCTGAAAAGACTGTCAGAACAAGCTGCTAATAAGCCTGAAGATATCCAATTACAAGAAGACATGCATAAGTTGAAGGGTGAAATTAGCCAAAAGAAGAATCAGATCCGTATCCTAGAGCAACGGATGATTGGATCCTTAGGACATGCACCAAGTAATAGCGAAATGTCTCAGGCTCTATCCAAGCTTACCACTGAGCTCAATGAAAAACTTTTTGAACTTGAGATCAAGTCTGCAGATAACAGGATACTTCAAGAGCAATTACAGTTGAAGAATTCAGAGAATGTTGAGATGCATGAGACAATTATTTCACTAAAGAAACAGATAAATTTCTTGGATAAAACTGCAACTAATTATCAGCATGTTGCTGATAATCAGACCGACTGTTCTAGAGATGTATTGGGAAAATATGACGAAGCACAATCAGTCAAAAACATGAATGTAATAGTTTCTCAAGTGCAGGGAGGAAGCAACGATTCAATTAAAAATTCCGAAATTCTTGTGCAGGCAGCTGAAATAGAGAGTTTAAGGGAAGAGAATGTGAGATTGGTGGAAGAGAAAGACGGGCTTGAAATTCAAAGTCAGAAACTTGCAGAGGAAGCTTCATACGCAAAAGAGCTGGCAGCAGCTGCAGCAGTTGAACTCCGAAACCTGGCTGAAGAAGTGACTAAACTTACATATGAAAATGCAGAGCTGAGTGGTGATCTGTCAGCTGCAAAAGAGACACCTGGCAAGTCAAACTTGTCTCCAACATCTTATGAAAGCAAGCAAAATATTAATAATAGTTTTCAACTAGATGGGAAATCAAAAAAGCGGGGGAATGAATTTCTTGTTGAGGAGTTGCAGAAGGACCTTAGTGCTAGACTCCAAAGAGAAGCTGCACTAGAAGCAGCTCTATCTGTGAAAGTCGAAGTTGAAGCTGACCTAAGAAGGACACTTGATGAAATAAAACACCAAAAACAAGATTTGGAATATGAGCTTACAAGCATGCAGATACTGATGTCAAAGATGAGAAAGTCTGGCATTAATGTTGTGGACAAGTCAACGGTTCATGTGCGTGATGATGTACAAACCAAGGTTAAAATTGGATATCCAACATCTAATGGTTACTCTCATAGGAAACAGTACAAAGAAACTGAAAATTTTGGAAGCATGGAAGATATGATTGTATTAGAAGAACTAAGGGCTAATTATCAAAGAGAGAGAAGAAGATGCAAGGAACTTGAAAATCATATTTCTATATTGAAGGGTGAGGATATCGCTGGTCTGGATGTTATGGCTCTTGAGGAACTACAAAACCTTCATATTGAGGCAATAACAAAGATTTGTCATGCAAAGTACGCAAATCAAAACTTGTAG 3375 0.4228 MSSASGYGRSSQRASVSPLRSRKLPAGPAKPAGRPTTPSSSSTSSRPSTKASISSVATAAVADVSKAKENVTVTVRFRPLSGREINKGDEVAWYADGDHIVRNEYNPSIAYGFDKVFGPATTTRHVYDVAAQHVVSGTMEGINGTVFAYGVTSSGKTHTMHGEQKSPGVIPLAVKDVFSIIQETPGREFLLRVSYLEIYNEVINDLLDPTGQNLRIREDAQGTYVEGIKEEVVLSPAHALSLIATGEEHRHVGSNNFNLVSSRSHTIFTLTVESSSRGENIGEEDVTLSHLHLIDLAGSESSKTETTGLRRKEGSYINKSLLTLGTVIAKLTDGKATHIPYRDSKLTRLLQSSLSGHGRISLICTVTPASSSSEETHNTLKFAHRSKHVEIKVSQNKILDEKSLIKKYQREISELKQELQHLKRGMVENPNMATTSSQEDLVTLKLQLEAGQSKLKSRLEEEEQAKAALMGRIQRLTKLILVSTKNAMSSSILERPSHRRRHSFAEDELAYLPDRKRESWINDDAGSHASVPSPEEKDDVTNLDELGKDYKRSKRRGMLGWLKLRKPDNVDGLSPNVDSEGSANGSPASASKLTPTRVMLYDMKDSRRNSVSRKDNAPSINSFTGRTQAGDLFSVTVGGRQLPPTGTTVTDQMDLLREQVKMLAGEVAFCISSLKRLSEQAANKPEDIQLQEDMHKLKGEISQKKNQIRILEQRMIGSLGHAPSNSEMSQALSKLTTELNEKLFELEIKSADNRILQEQLQLKNSENVEMHETIISLKKQINFLDKTATNYQHVADNQTDCSRDVLGKYDEAQSVKNMNVIVSQVQGGSNDSIKNSEILVQAAEIESLREENVRLVEEKDGLEIQSQKLAEEASYAKELAAAAAVELRNLAEEVTKLTYENAELSGDLSAAKETPGKSNLSPTSYESKQNINNSFQLDGKSKKRGNEFLVEELQKDLSARLQREAALEAALSVKVEVEADLRRTLDEIKHQKQDLEYELTSMQILMSKMRKSGINVVDKSTVHVRDDVQTKVKIGYPTSNGYSHRKQYKETENFGSMEDMIVLEELRANYQRERRRCKELENHISILKGEDIAGLDVMALEELQNLHIEAITKICHAKYANQNL* 1125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0745 1124 Coils Coil 845 872 - -
Pvu1g0745 1124 Coils Coil 398 425 - -
Pvu1g0745 1124 MobiDBLite consensus disorder prediction 575 593 - -
Pvu1g0745 1124 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 424 IPR027417 -
Pvu1g0745 1124 Coils Coil 748 768 - -
Pvu1g0745 1124 CDD KISc_CENP_E 70 389 - -
Pvu1g0745 1124 MobiDBLite consensus disorder prediction 908 927 - -
Pvu1g0745 1124 MobiDBLite consensus disorder prediction 523 545 - -
Pvu1g0745 1124 MobiDBLite consensus disorder prediction 1 18 - -
Pvu1g0745 1124 MobiDBLite consensus disorder prediction 1 51 - -
Pvu1g0745 1124 SMART kinesin_4 68 397 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu1g0745 1124 MobiDBLite consensus disorder prediction 912 927 - -
Pvu1g0745 1124 MobiDBLite consensus disorder prediction 530 545 - -
Pvu1g0745 1124 Coils Coil 1063 1090 - -
Pvu1g0745 1124 Gene3D Kinesin motor domain 60 421 IPR036961 -
Pvu1g0745 1124 ProSiteProfiles Kinesin motor domain profile. 70 389 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu1g0745 1124 PANTHER KINESIN-LIKE PROTEIN KIN-7C, MITOCHONDRIAL 55 1110 - -
Pvu1g0745 1124 PANTHER CENTROMERE PROTEIN E 55 1110 - -
Pvu1g0745 1124 Pfam Kinesin motor domain 76 389 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu1g0745 1124 MobiDBLite consensus disorder prediction 34 51 - -
Pvu1g0745 1124 Coils Coil 887 907 - -
Pvu1g0745 1124 Coils Coil 974 1005 - -
Pvu1g0745 1124 MobiDBLite consensus disorder prediction 569 595 - -
Pvu1g0745 1124 PRINTS Kinesin heavy chain signature 141 162 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu1g0745 1124 PRINTS Kinesin heavy chain signature 255 272 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu1g0745 1124 PRINTS Kinesin heavy chain signature 290 308 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu1g0745 1124 PRINTS Kinesin heavy chain signature 339 360 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu1g0745 1124 Coils Coil 452 479 - -
Pvu1g0745 1124 ProSitePatterns Kinesin motor domain signature. 289 300 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pvu1g0745 1124 Coils Coil 694 714 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0745 Pvu-Chr1 9688739 9708609 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0745 66 716 Miscellaneous Gene Families AT5G06670 57.658 0.0 724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0745 K11498 - gmx:100817131 1878.22