Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0704 ATGGCAATTGCGCCCGCACAAATTCCTACTAGCTTTGGCCATGAGTTGAGGGCATGTCTTCGTTGCCGCCTTGTCAAAACCTACGATCAGTTCCGAGAGTCAGGCTGTGAGAACTGCCAATTCTTTAAGATGGAAGAAGATCATGAGCGTGTTGTTGAATGCACTACTCCTAATTTTAATGGGATCATTTCAGTCATGGATCCCACTCGCAGCTGGGCTGCCCGATGGTTGCGCATTGCCAAATTTGCTCCTGGTGTTTATACTCTTGCTGTCTCAGAGGCACTTCCAGAAGAGATGCAGGCTATATGCGAGGACGAGCGTGTGCAATATATGCCCCCAAAACGTTTGTGA 351 0.4843 MAIAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCQFFKMEEDHERVVECTTPNFNGIISVMDPTRSWAARWLRIAKFAPGVYTLAVSEALPEEMQAICEDERVQYMPPKRL* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0704 116 Pfam Spt4/RpoE2 zinc finger 16 92 IPR022800 -
Pvu1g0704 116 PANTHER SUPPRESSOR OF TY 4 1 116 IPR009287 GO:0005634|GO:0006355|GO:0008270|GO:0032786
Pvu1g0704 116 PIRSF Spt4 1 116 IPR009287 GO:0005634|GO:0006355|GO:0008270|GO:0032786
Pvu1g0704 116 Gene3D - 2 106 IPR038510 -
Pvu1g0704 116 CDD Spt4 14 110 IPR022800 -
Pvu1g0704 116 SUPERFAMILY RNA polymerase subunits 11 91 IPR029040 -
Pvu1g0704 116 SMART Spt4_2 16 92 IPR022800 -
Pvu1g0704 116 PANTHER TRANSCRIPTION ELONGATION FACTOR SPT4 HOMOLOG 2 1 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0704 Pvu-Chr1 8906563 8911013 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0704 K15171 - gmx:100306659 233.802