Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0680 ATGAATTCAGGTTTCTGTATGGTGTCATCCCTGAACCACCAAGAAGTTCAAAGCCGTTTCTTCGACCCCTCTTGGCTAAAAATGCAGCCCCACGTTCCCATGAGCTTCGTTTGGCCTAAGGAGTGTGTAGTGGACGCGAACGAGGAGTTCCAAGCCCCAATGGTGGACCTTGGGGGGTTCTTCAGAGGTGATGAAGAGGCCACGAACGTTGCCGTTAAGCTCATACGCAAGGCATGCTCCACCCACGGATTCTTCCAAGTTATCAACCACGGGGTTGATCCTCTTCTCATTGGTGAAGCGTATGAACAAATGGATGCTTTTTTTAAGCTCCCAATTAACAGAAAAGTTAGTATTCATAAGACTCCGGGTTCTGTCTGGGGCTATTCTGGTGCACATGCTGATCGATTCTCCTCCAAATTGCCCTGGAAAGAAACCCTTTCTTTCCCCTTCCATGATAACAACACCTTAGACCCCGTTGTCACTAGCTTCTTTAACTCCACCTTAGGACAAGACTTTGAACAAGCAGGAGTGGTATTCCAGAAGTACTGTGAATCCATGAAGGAGTTGGGGATGAAGCTGTTGGAGCTATTGGCGATTAGCTTGGGAGTGGATAGGTTGCATTATAAGGAGTTGTTTGAAGATGGTTGTTCTGTGATGAGATGCAACTTCTACCCTTCATGTCAGCAGCCAAGTCTTGCACTAGGAACAGGACCACACTGTGACCCAACATCTCTCACCATTCTTCACCAAGACCAAGTTGGAGGGCTGGATGTGTTTGCAGACAACACGTGGCAGACGGTTCCGCCTCGTCCTCGTGCTCTTGTAGTTAACATTGGTGATACTTTCACGGCATTATCAAATGGGAGATACAAGAGTTGCCTGCATAGGGCAGTGGTTAACAAGTACAAAGAGAGGAGGTCCTTGGCATTCTTTCTGTGCCCGAAAGAGGACAAAGTGGTGAGAGCCCCAGAGGATATTGTGCGTAGGGATGGGACAAAACAGTATCCAGATTTCACATGGTCGAATTTGCTTGAATTCACACAAAAGTACTACAGATCCGACGAAGCTACACTGCAGAACTTCACCAAGTGGTTGCTATCTTCCAAACAACAAACTCTTTAA 1122 0.4706 MNSGFCMVSSLNHQEVQSRFFDPSWLKMQPHVPMSFVWPKECVVDANEEFQAPMVDLGGFFRGDEEATNVAVKLIRKACSTHGFFQVINHGVDPLLIGEAYEQMDAFFKLPINRKVSIHKTPGSVWGYSGAHADRFSSKLPWKETLSFPFHDNNTLDPVVTSFFNSTLGQDFEQAGVVFQKYCESMKELGMKLLELLAISLGVDRLHYKELFEDGCSVMRCNFYPSCQQPSLALGTGPHCDPTSLTILHQDQVGGLDVFADNTWQTVPPRPRALVVNIGDTFTALSNGRYKSCLHRAVVNKYKERRSLAFFLCPKEDKVVRAPEDIVRRDGTKQYPDFTWSNLLEFTQKYYRSDEATLQNFTKWLLSSKQQTL* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0680 373 Pfam 2OG-Fe(II) oxygenase superfamily 217 314 IPR044861 -
Pvu1g0680 373 PANTHER GIBBERELLIN 20-OXIDASE 12 368 - -
Pvu1g0680 373 PRINTS Isopenicillin N synthase signature 75 92 - -
Pvu1g0680 373 PRINTS Isopenicillin N synthase signature 239 260 - -
Pvu1g0680 373 PRINTS Isopenicillin N synthase signature 274 300 - -
Pvu1g0680 373 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 12 368 - -
Pvu1g0680 373 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 215 314 IPR005123 -
Pvu1g0680 373 Gene3D - 26 346 IPR027443 -
Pvu1g0680 373 SUPERFAMILY Clavaminate synthase-like 29 353 - -
Pvu1g0680 373 Pfam non-haem dioxygenase in morphine synthesis N-terminal 53 151 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0680 Pvu-Chr1 8381806 8385990 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0680 31 352 Glycosyltransferase AT5G59530 29.167 2.93e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0680 K05282 - gmx:100801187 692.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0680 1 8381806 8385990 Pvu1g0680 1 8381806 8385990 ECH