Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0672 ATGGCTGAAATAACATCAACTATAACCCAATCACACTCTTCTCAACCTAAATTGAATACTTCTTCTCAGGTAACAATGGTGAGTCATCACAACGCAGATCCTTTTTCTGCTTCGGATGATGACATACCCACGGTTGATTACTCTCTACTGTTTTCTGATAACCCTGTTCAACGATTTCTTGCCCTAGAAAACCTTCGCCAAGCATGTCAGGAATATGGCTTCTTCTATCTGGTAAACCACACCATCCCAGATGAAGTGTTGGACTCTATTCTAAAGGGATTTTCTGATTTCTTTGATCCAAAAACCATAGATGAGAGAAAAGTCTTCCGCAAAAGTGGTCCATCAGACAAAATTCGATGGGACCTAAACTCGTCTGCTGGAGAAAATAGGGAATATCTCAAAGTTATCGCACATCCCCAGTTCCATGCTCCTTCTAAACCATCAGGGATTAGAAAAATCTTAGAAGAATATCACAAAGCAATGAGGAATATAGTAGCAGGATTGGCAGGAGCAGTGTCCACAACCTTAGGGTTTGAAGAAAAGTACATAGAAAAGGAGTTGAACCTGAAGTCAGGGTTTGATGTAATGGCTATGAATCTATATCCACCAAATTCTAGATCGAAGGGAGTAATTGGTATCCCTGAACACACTGACCCTGGCTTCGTTGTTACCCTAGTGCAAGATGTAGATGGTGGTCTCCAAATCCTATCCCATCAAGGAAACTGGATCAATGTTTATATACCCCATCATGCCATACTCATCCAACTTGGTGATCATCTTGAGGTCTTAACCAATGGAAAGTACAAGAGTCACATCCATCGAGTTATTGTGAACAAAAATAAGGTGCCAAGAATATCAGTGGTCACCCTTCATGGACCTGAGTTGGACAAATTCATCAGCCCCGCCGTAGAGTTTGTTGATGAAGAACATCCACAAAAATACCATGGGATGACCTATAAAGAATCATTAGAAGCAAATGGGGGGGATGACATAGATGTGCAATCCTCACTTGAGAAACTTAAGATTTATGTATGA 1035 0.4087 MAEITSTITQSHSSQPKLNTSSQVTMVSHHNADPFSASDDDIPTVDYSLLFSDNPVQRFLALENLRQACQEYGFFYLVNHTIPDEVLDSILKGFSDFFDPKTIDERKVFRKSGPSDKIRWDLNSSAGENREYLKVIAHPQFHAPSKPSGIRKILEEYHKAMRNIVAGLAGAVSTTLGFEEKYIEKELNLKSGFDVMAMNLYPPNSRSKGVIGIPEHTDPGFVVTLVQDVDGGLQILSHQGNWINVYIPHHAILIQLGDHLEVLTNGKYKSHIHRVIVNKNKVPRISVVTLHGPELDKFISPAVEFVDEEHPQKYHGMTYKESLEANGGDDIDVQSSLEKLKIYV* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0672 344 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 31 342 - -
Pvu1g0672 344 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 192 293 IPR005123 -
Pvu1g0672 344 Gene3D - 2 328 IPR027443 -
Pvu1g0672 344 SUPERFAMILY Clavaminate synthase-like 23 322 - -
Pvu1g0672 344 MobiDBLite consensus disorder prediction 1 22 - -
Pvu1g0672 344 Pfam 2OG-Fe(II) oxygenase superfamily 195 292 IPR044861 -
Pvu1g0672 344 Pfam non-haem dioxygenase in morphine synthesis N-terminal 42 112 IPR026992 -
Pvu1g0672 344 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 31 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0672 Pvu-Chr1 8234705 8236152 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0672 36 342 Glycosyltransferase AT5G59530 31.132 7.68e-36 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0672 - - gmx:100783009 579.711