Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0668 ATGGTGAAGGAAACGGAGTACTACGATATCCTCGGGATCACTCCCTCTGCCTCCGAAGACCAAATTCGCAAGGCCTATTACCATAAGGCAATGCGAGTTCATCCCGATAAAAACCCCAACGATCCTCGCGCTGCCGAGAACTTCCAGATATTGGGTGAAGCGTACCAAGTTCTGAGTGATCCGGTTCAGAGGATTGCGTACAATCAAAATGGGAAACATTCTGTATCGAGGGAAACTATGCTTGACCCCATGGCTGTCTTCGCCCTGCTCTTTGGAAGTGAATTATTTGAGGACTACATAGGGCATCTAGCTGTGGCATCAATGGCTTCTTCTGAGCTAGCTGATGAAACTGAGGATCCTGATAAACTGAATGAGAAGTTAAAGGCTGTCCAAAGAGAAAGGGAAGAAAAGCTAGTGAGAATTTTAAAAGATTATCTTGCCCAATATGTCCGTGGTGACAAAAAGGGATTCTTCCTACGAGCAGAATCTGAAGCAAGAAGGCTTTCTCGTGCTGCATTTGGAGTAGACATGTTACATACCATCGGCTACATATATTCAAGACAGGCTGCACAAGAACTAGGGAAAAAGGCCATTTATCTTGGAGTGCCATTTTTGGCTGAATGGGTACGCAATAAAGGACATTTCTGGAAATCACAATTCACAGCTGCTAAAGGTGCTTATCAGTTAATTCAGCTTCAAGAAGACATCCGGAAGCAATTTAAAATGGATGGTAGTAGTGTCCCTGAAAATGATGTTGACTCTCACATTCGCCTCAATAAGGACACATTGATCAGTTCCTTGTGGAAGTTAAATGTAGTGGACATTGAAGTAACCCTTGTACACGTGTGTCAAATGGTACTAAGGGAAAATAACGTTAAGAAAGAAGAACTTAAAGTTCGGGCTACGGCTCTTAAAATTCTTGGGAAGATATTTCAGGACAAGTATCCAAAAGGAGAAACATTGAAGAAGAAGATTGCTGCTAGTTCTGATGACGAAGGAAGCAGTTCTGATTCTTCAGACGATGAATCGCCTAGAGGAATTTCCTATCGAACTCCCTTTTTCACGCAGGGTATCGGTAGACTTTTCAAATGCCTCTGTAATCCAGCATTTGATGTGGATGATGAAGAGATAGTTTACAAAAGCAAATGA 1149 0.4247 MVKETEYYDILGITPSASEDQIRKAYYHKAMRVHPDKNPNDPRAAENFQILGEAYQVLSDPVQRIAYNQNGKHSVSRETMLDPMAVFALLFGSELFEDYIGHLAVASMASSELADETEDPDKLNEKLKAVQREREEKLVRILKDYLAQYVRGDKKGFFLRAESEARRLSRAAFGVDMLHTIGYIYSRQAAQELGKKAIYLGVPFLAEWVRNKGHFWKSQFTAAKGAYQLIQLQEDIRKQFKMDGSSVPENDVDSHIRLNKDTLISSLWKLNVVDIEVTLVHVCQMVLRENNVKKEELKVRATALKILGKIFQDKYPKGETLKKKIAASSDDEGSSSDSSDDESPRGISYRTPFFTQGIGRLFKCLCNPAFDVDDEEIVYKSK* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0668 382 ProSiteProfiles dnaJ domain profile. 6 71 IPR001623 -
Pvu1g0668 382 Pfam DnaJ domain 6 68 IPR001623 -
Pvu1g0668 382 CDD DnaJ 6 60 IPR001623 -
Pvu1g0668 382 PRINTS DnaJ domain signature 8 26 IPR001623 -
Pvu1g0668 382 PRINTS DnaJ domain signature 26 41 IPR001623 -
Pvu1g0668 382 PRINTS DnaJ domain signature 43 63 IPR001623 -
Pvu1g0668 382 ProSitePatterns Nt-dnaJ domain signature. 48 67 IPR018253 -
Pvu1g0668 382 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 366 - -
Pvu1g0668 382 MobiDBLite consensus disorder prediction 324 347 - -
Pvu1g0668 382 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 366 - -
Pvu1g0668 382 SUPERFAMILY Chaperone J-domain 2 101 IPR036869 -
Pvu1g0668 382 Gene3D DnaJ domain 1 85 IPR036869 -
Pvu1g0668 382 SMART dnaj_3 5 63 IPR001623 -
Pvu1g0668 382 Pfam X-domain of DnaJ-containing 131 315 IPR026894 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0668 Pvu-Chr1 8167884 8173167 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0668 7 81 Miscellaneous Gene Families AT1G16680 41.558 1.19e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0668 - - gmx:100793811 700.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0668 1 8167884 8173167 Pvu1g0668 1 8167884 8173167 ECH